PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA10G01080.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 828aa MW: 90819.3 Da PI: 9.5803 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 403.8 | 2.2e-123 | 1 | 342 | 1 | 301 |
GAGA_bind 1 mdddgsre.rnkg.yyepaaslkenlglqlmssia.erdaki...........rernlalsekkaavaerd....................... 57 mddd+s++ r +g ++e+ ++nlglqlmss++ +rd+k+ +++++ +++++++++rd ONIVA10G01080.2 1 MDDDASMSiR-WGgFFESP---ARNLGLQLMSSVPaDRDTKQllsgspflhhqHQQQHVPHHHHQPHHPRDcgangnanggamppppateapps 90 9*******66.777***99...88**********99***************99777777*********************************** PP GAGA_bind 58 ..maflqrdkalae..rnkalverdnkllalllvensla...salpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaee 143 m+f+++d++++ +++++++r++k+l++l+v ++++ +++pvg+++++gt++++++qq++epq ++++ + +++ee+++++ iee++++ ONIVA10G01080.2 91 mpMNFVRSDMWMHPqqQQQHHHPREHKVLHNLTVGHGSShiaHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPPPqQPKEECISSPLIEENVPV 184 ************9754778999**************9988999***************************99999899**************** PP GAGA_bind 144 akekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCt 236 ++e + +kkrq++++pk+++akk+kk s++++++ ++++a+ +r++ ++k+i++v+ng++lD s++P+PvCsCtGa++qCY+WG+GGWqSaCCt ONIVA10G01080.2 185 IDEPPPPKKRQQGRQPKVPRAKKPKK-SAAPREDGAPPNAPaPRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCT 277 **************************.88999*******999**************************************************** PP GAGA_bind 237 ttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 ttiS+yPLP+stkrrgaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvtir ONIVA10G01080.2 278 TTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR 342 ****************************************************************8 PP | |||||||
2 | GAGA_bind | 401.9 | 8.1e-123 | 484 | 824 | 1 | 300 |
GAGA_bind 1 mdddgsre.rnkg.yyepaaslkenlglqlmssia.erdaki...........rernlalsekkaavaerd....................... 57 mddd+s++ r +g ++e+ ++nlglqlmss++ +rd+k+ +++++ +++++++++rd ONIVA10G01080.2 484 MDDDASMSiR-WGgFFESP---ARNLGLQLMSSVPaDRDTKQllsgspflhhqHQQQHVPHHHHQPHHPRDcgangnanggamppppateapps 573 9*******66.777***99...88**********99***************99777777*********************************** PP GAGA_bind 58 ..maflqrdkalae..rnkalverdnkllalllvensla...salpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaee 143 m+f+++d++++ +++++++r++k+l++l+v ++++ +++pvg+++++gt++++++qq++epq ++++ + +++ee+++++ iee++++ ONIVA10G01080.2 574 mpMNFVRSDMWMHPqqQQQHHHPREHKVLHNLTVGHGSShiaHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPPPqQPKEECISSPLIEENVPV 667 ************9754778999**************9988999***************************99999899**************** PP GAGA_bind 144 akekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCt 236 ++e + +kkrq++++pk+++akk+kk s++++++ ++++a+ +r++ ++k+i++v+ng++lD s++P+PvCsCtGa++qCY+WG+GGWqSaCCt ONIVA10G01080.2 668 IDEPPPPKKRQQGRQPKVPRAKKPKK-SAAPREDGAPPNAPaPRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCT 760 **************************.88999*******999**************************************************** PP GAGA_bind 237 ttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvti 300 ttiS+yPLP+stkrrgaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkHGtnkfvti ONIVA10G01080.2 761 TTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTI 824 ***************************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 828 aa Download sequence |
MDDDASMSIR WGGFFESPAR NLGLQLMSSV PADRDTKQLL SGSPFLHHQH QQQHVPHHHH 60 QPHHPRDCGA NGNANGGAMP PPPATEAPPS MPMNFVRSDM WMHPQQQQQH HHPREHKVLH 120 NLTVGHGSSH IAHHDPVGYG MIPGTHTLQM MQQQTEPQPQ PPPPPQQPKE ECISSPLIEE 180 NVPVIDEPPP PKKRQQGRQP KVPRAKKPKK SAAPREDGAP PNAPAPRRRG PRKNIGMVIN 240 GIDLDLSRIP TPVCSCTGAP QQCYRWGAGG WQSACCTTTI STYPLPMSTK RRGARIAGRK 300 MSHGAFKKVL EKLAGEGYNL NNPIDLKTFW AKHGTNKFVT IRAHSSWALL PSLSDDGLYD 360 QEILDVAPLQ AQPSSPEVTP AVLQIPMAPE ILDVAPLQAQ PSSPEVTPAV LQIPMAPDIS 420 SLSVSGADLH PPAEQRPAPP PPPSVPPKRF NFWDVRRWSR PCAAPLLFES GGWSVGFGGG 480 GGEMDDDASM SIRWGGFFES PARNLGLQLM SSVPADRDTK QLLSGSPFLH HQHQQQHVPH 540 HHHQPHHPRD CGANGNANGG AMPPPPATEA PPSMPMNFVR SDMWMHPQQQ QQHHHPREHK 600 VLHNLTVGHG SSHIAHHDPV GYGMIPGTHT LQMMQQQTEP QPQPPPPPQQ PKEECISSPL 660 IEENVPVIDE PPPPKKRQQG RQPKVPRAKK PKKSAAPRED GAPPNAPAPR RRGPRKNIGM 720 VINGIDLDLS RIPTPVCSCT GAPQQCYRWG AGGWQSACCT TTISTYPLPM STKRRGARIA 780 GRKMSHGAFK KVLEKLAGEG YNLNNPIDLK TFWAKHGTNK FVTISCLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-56 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA10G01080.2 |