PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA10G01080.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family BBR-BPC
Protein Properties Length: 422aa    MW: 46050.4 Da    PI: 8.8848
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA10G01080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind56.99.8e-181123186
        GAGA_bind   1 mdddgsre.rnkg.yyepaaslkenlglqlmssia.erdaki...........rernlalsekkaavaerd....................... 57 
                      mddd+s++ r +g ++e+    ++nlglqlmss++ +rd+k+           +++++  +++++++++rd                       
  ONIVA10G01080.1   1 MDDDASMSiR-WGgFFESP---ARNLGLQLMSSVPaDRDTKQllsgspflhhqHQQQHVPHHHHQPHHPRDcgangnanggamppppateapps 90 
                      9*******66.777***99...88**********99***************99777777*********************************** PP

        GAGA_bind  58 ..maflqrdkalae..rnkalverdnkllalll 86 
                        m+f+++d++++   +++++++r++k+++ ++
  ONIVA10G01080.1  91 mpMNFVRSDMWMHPqqQQQHHHPREHKMMQQQT 123
                      ************9754778999******99886 PP
2GAGA_bind311.43e-95116310108301
        GAGA_bind 108 idslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesad.erskaekksidlvln 199
                       +++qq++epq ++++ + +++ee+++++ iee++++++e + +kkrq++++pk+++akk+kk s++++++ ++++a+ +r++ ++k+i++v+n
  ONIVA10G01080.1 116 HKMMQQQTEPQPQPPPPPqQPKEECISSPLIEENVPVIDEPPPPKKRQQGRQPKVPRAKKPKK-SAAPREDGAPPNAPaPRRRGPRKNIGMVIN 208
                      568999999**9999998899******************************************.88999*******999*************** PP

        GAGA_bind 200 gvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHG 293
                      g++lD s++P+PvCsCtGa++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmS+gafkk+LekLa+eGy+l+np+DLk++WAkHG
  ONIVA10G01080.1 209 GIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHG 302
                      ********************************************************************************************** PP

        GAGA_bind 294 tnkfvtir 301
                      tnkfvtir
  ONIVA10G01080.1 303 TNKFVTIR 310
                      *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MDDDASMSIR WGGFFESPAR NLGLQLMSSV PADRDTKQLL SGSPFLHHQH QQQHVPHHHH  60
QPHHPRDCGA NGNANGGAMP PPPATEAPPS MPMNFVRSDM WMHPQQQQQH HHPREHKMMQ  120
QQTEPQPQPP PPPQQPKEEC ISSPLIEENV PVIDEPPPPK KRQQGRQPKV PRAKKPKKSA  180
APREDGAPPN APAPRRRGPR KNIGMVINGI DLDLSRIPTP VCSCTGAPQQ CYRWGAGGWQ  240
SACCTTTIST YPLPMSTKRR GARIAGRKMS HGAFKKVLEK LAGEGYNLNN PIDLKTFWAK  300
HGTNKFVTIR AHSSWALLPS LSDDGLYDQE ILDVAPLQAQ PSSPEVTPAV LQIPMAPEIL  360
DVAPLQAQPS SPEVTPAVLQ IPMAPDISSL SVSGADLHPP AEQRPAPPPP PSVPPVSRPG  420
ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.13e-60BBR-BPC family protein