PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA09G15440.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 645aa MW: 66961.5 Da PI: 10.3923

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G15440.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.8	8e-11	27	77	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT........TTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg........kgRtlkqcksrwqk 46 W t E++ll++av ++G+g+W+++a +++ g+t+ +c++r++ ONIVA09G15440.1 27 WGTLEELLLACAVSRHGTGSWDSVAMEVQtrsplaarPGLTPTSCRLRFRH 77 9999********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 645 aa Download sequence
MADGSDGPDV SPAAAAAAGG GGGDEIWGTL EELLLACAVS RHGTGSWDSV AMEVQTRSPL 60 AARPGLTPTS CRLRFRHLHR RFSVGGAVEE DDDDEEAEEG GPDASAADGW MDELRRLRVA 120 ELRREVERCD LSIGTLQTKV KRLREEREQS IHGGGGGEGK PETANGDERL SSEEPGRSCR 180 ESNSTDLKPA ARAGDHSVKA EEEDEDAAAA KQQASGESVA ASKESSDLRS SASLRRRRRH 240 KPGADEDADG EEASALRPPS QSPSSSSSSQ PLAALLDTFA ARFGPLLERL HESQESDAYR 300 GAIRRHVDIE MVRRKLDASP AGGGGGAAAA AEFYRDLLLL CANALVFFPR AGPERGAAAE 360 ARALVYSSLR LREPKQEPGT AAAAAVAAAA GSPPAEDTRR AEGVVSVGGG GAGIVGSLIE 420 KGGKPLIVCR KRSSIAKAAA AAKKEESAEK GEAAEEGEGS DDGKKKVSVS ASASKDKAWG 480 LRTKKGRGPG KNSASVGGRK MAKLSEATEA ATDGSKKPDK KIAADAATPA KKRNAVDFLK 540 RLNQGSSPSK KKKKGSPMGT RKRAAAATSP EQPQKTRKGP GRKDAGRGGS KKGGKSATPK 600 RSVGRPPSKR GAAAATTPPP SKRAKVNRSE KTAATATAAK RGGRR

Sequence ? help Back to Top

Protein Sequence Length: 645 aa Download sequence

MADGSDGPDV SPAAAAAAGG GGGDEIWGTL EELLLACAVS RHGTGSWDSV AMEVQTRSPL  60
AARPGLTPTS CRLRFRHLHR RFSVGGAVEE DDDDEEAEEG GPDASAADGW MDELRRLRVA  120
ELRREVERCD LSIGTLQTKV KRLREEREQS IHGGGGGEGK PETANGDERL SSEEPGRSCR  180
ESNSTDLKPA ARAGDHSVKA EEEDEDAAAA KQQASGESVA ASKESSDLRS SASLRRRRRH  240
KPGADEDADG EEASALRPPS QSPSSSSSSQ PLAALLDTFA ARFGPLLERL HESQESDAYR  300
GAIRRHVDIE MVRRKLDASP AGGGGGAAAA AEFYRDLLLL CANALVFFPR AGPERGAAAE  360
ARALVYSSLR LREPKQEPGT AAAAAVAAAA GSPPAEDTRR AEGVVSVGGG GAGIVGSLIE  420
KGGKPLIVCR KRSSIAKAAA AAKKEESAEK GEAAEEGEGS DDGKKKVSVS ASASKDKAWG  480
LRTKKGRGPG KNSASVGGRK MAKLSEATEA ATDGSKKPDK KIAADAATPA KKRNAVDFLK  540
RLNQGSSPSK KKKKGSPMGT RKRAAAATSP EQPQKTRKGP GRKDAGRGGS KKGGKSATPK  600
RSVGRPPSKR GAAAATTPPP SKRAKVNRSE KTAATATAAK RGGRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	531	553	KKRNAVDFLKRLNQGSSPSKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-12	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G15440.1