PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA09G13890.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 352aa MW: 37152.9 Da PI: 6.5113

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G13890.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.6	5.3e-14	133	184	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+ ONIVA09G13890.1 133 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YAQRGDQASIVGGAINFVKELE 184 79**************************...*****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MALEAVLLSR GDLFGRRRCA MEGGGGGGGG GGWSSPFSGF EGVMDLDGGN WDAAACSSML 60 LHGFQELEIP AAAAAAAAMA PPPPPVEPAN CAENAGGVGG HQEDQAAATA VQSGRRKRRR 120 ARAAKNKEEV ESQRMTHIAV ERNRRKQMNE YLAVLRSLMP PSYAQRGDQA SIVGGAINFV 180 KELEQLLQSL EARKSSRQCA AHDAAAAAAP FASFFTFPQY SMSAAAAAAP VAPVVNEVHG 240 RDDGGAGTAE AEASGSKPSA VADVEVTMVE SHANLRVLSR RRPRQLLRLV VALQGHRLTV 300 LHLNMTSAGH MVLYSFSLKV EDDCQLTSVD EIATAAHQII EKIQEEQGCS LD

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MALEAVLLSR GDLFGRRRCA MEGGGGGGGG GGWSSPFSGF EGVMDLDGGN WDAAACSSML  60
LHGFQELEIP AAAAAAAAMA PPPPPVEPAN CAENAGGVGG HQEDQAAATA VQSGRRKRRR  120
ARAAKNKEEV ESQRMTHIAV ERNRRKQMNE YLAVLRSLMP PSYAQRGDQA SIVGGAINFV  180
KELEQLLQSL EARKSSRQCA AHDAAAAAAP FASFFTFPQY SMSAAAAAAP VAPVVNEVHG  240
RDDGGAGTAE AEASGSKPSA VADVEVTMVE SHANLRVLSR RRPRQLLRLV VALQGHRLTV  300
LHLNMTSAGH MVLYSFSLKV EDDCQLTSVD EIATAAHQII EKIQEEQGCS LD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	116	120	RKRRR
2	134	145	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	2e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G13890.1