PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA09G12460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 289aa MW: 32057.8 Da PI: 4.944 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.4 | 3.8e-19 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+llv++v q+G g+W+++a+ g++R++k+c++rw +yl ONIVA09G12460.1 17 KGPWTAQEDKLLVEYVMQHGEGRWNSVAKITGLKRSGKSCRLRWVNYL 64 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E+ ++++++++G++ W+tIar ++ gRt++++k++w+++ ONIVA09G12460.1 70 RGKITPQEESVILELHALWGNR-WSTIARSLP-GRTDNEIKNYWRTH 114 8999******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MEGQQFAWGR EEGGWRKGPW TAQEDKLLVE YVMQHGEGRW NSVAKITGLK RSGKSCRLRW 60 VNYLRPDLKR GKITPQEESV ILELHALWGN RWSTIARSLP GRTDNEIKNY WRTHFKKGKP 120 SKNIERARAR FLKQRREMQQ QSQLMQTGQQ QQLGQDDDAT SAVVDDNLAE VAPPAATSLT 180 HDGELQIMQE MAPDMDDLLY YHPGDMSPYS YDDLLGSGGG ECGAVAASAG AAASTSEGSS 240 EELDGGAATW GSLWNLDDVV HDMMIDCAAG AGCCWGSFPP LQDQGLAFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA09G12460.1 |