PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA09G09550.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 363aa    MW: 37698.9 Da    PI: 5.7947
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA09G09550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.4e-13108154354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r+h+e+ErrRR+riN  +++Lr+ll +      +K +Ka+ L +++e++k+L
  ONIVA09G09550.1 108 RSHSEAERRRRQRINGHLARLRSLLANT-----TKTDKASLLAEVIEHVKEL 154
                      78***********************998.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MWEGGSHDAA AQLLPWFVGE PAAAAVGGYG GCVDVVGQGG VFGFGFEAAA APVVTRQQRG  60
GAAAAEGSSR GGGGKPAVVS GLLGSLQAEL GRVTAREIMD AKALAASRSH SEAERRRRQR  120
INGHLARLRS LLANTTKTDK ASLLAEVIEH VKELKRQTTA IAAAAAAGDY HGNDEDDDDA  180
VVGRRSAAAQ QLLPTEADEL AVDAAVDAEG RLVVRASLCC EDRPDLIPDI ARALAALRLR  240
ARRAEITTLG GRVRSVLLIT ADEQQQQHCD DVDDDEDGHR LLLRHGIDGA GAAAGDDDEC  300
AASHRRHECI ATVQEALRGV MDRRAAASSG DTSSSGGAVV AGGGGGSIKR QRMNYGVHEQ  360
CSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.16e-38bHLH family protein