PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA09G05410.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 361aa MW: 37940.2 Da PI: 6.5076

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA09G05410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	84	1.4e-26	125	185	1	58
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqKe+ g+++pr+YYrCt++ gC+++k+v+r++ed v++++Y+geH++ ONIVA09G05410.1 125 VDDGHSWRKYGQKEILGAKHPRGYYRCTHRhsqGCMATKQVQRTDEDAMVFDVIYHGEHTC 185 59*************************98999***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MESMEGNGGG RLVVTELSHI KELVRQLEGH LGGSGSPDLC KHLASQIFSV TERSIGMIRS 60 GHFDGHRKRS AAAVAAGDLD SATPSPLSDV SDLPFKATKK RKTSTEKKRH QIRVSSTGGV 120 ENPPVDDGHS WRKYGQKEIL GAKHPRGYYR CTHRHSQGCM ATKQVQRTDE DAMVFDVIYH 180 GEHTCVHKAV AAGAGKPETE TDTNAAAESR LHELSSGLTV KIEGLTAPPQ QQQGGGGWNA 240 MPPFCLSSPV SGLAPPDQHN PFSAPSTPEN RLAAAASSAA SPATSDSMAA PPFHQAAAAG 300 GDAAWRDAEL QEVVSALVAA TTATATAQPA PATAMVDADL SALDAFEFDP GFTIDITSFF 360 A

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MESMEGNGGG RLVVTELSHI KELVRQLEGH LGGSGSPDLC KHLASQIFSV TERSIGMIRS  60
GHFDGHRKRS AAAVAAGDLD SATPSPLSDV SDLPFKATKK RKTSTEKKRH QIRVSSTGGV  120
ENPPVDDGHS WRKYGQKEIL GAKHPRGYYR CTHRHSQGCM ATKQVQRTDE DAMVFDVIYH  180
GEHTCVHKAV AAGAGKPETE TDTNAAAESR LHELSSGLTV KIEGLTAPPQ QQQGGGGWNA  240
MPPFCLSSPV SGLAPPDQHN PFSAPSTPEN RLAAAASSAA SPATSDSMAA PPFHQAAAAG  300
GDAAWRDAEL QEVVSALVAA TTATATAQPA PATAMVDADL SALDAFEFDP GFTIDITSFF  360
A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	2e-32	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA09G05410.1