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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | ONIVA08G22710.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family | NAC | ||||||||
| Protein Properties | Length: 339aa MW: 36900.7 Da PI: 7.2318 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 169.3 | 1.2e-52 | 25 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeelv++yL++kv + + v i+evd++++ePw+Lp++++ +ekewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev+
ONIVA08G22710.1 25 LPPGFRFHPTDEELVTFYLAAKVFNGACCG-GVdIAEVDLNRCEPWELPEAARMGEKEWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVV 117
79*************************888.455***************9888999************************************** PP
NAM 94 sk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ +g+l+g+kktLvfykgrap+gekt+Wv+heyrl
ONIVA08G22710.1 118 AAaagGGALIGMKKTLVFYKGRAPRGEKTKWVLHEYRL 155
998988999***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 339 aa Download sequence |
MGDALWEMLG EEMAAAAAAA GEHGLPPGFR FHPTDEELVT FYLAAKVFNG ACCGGVDIAE 60 VDLNRCEPWE LPEAARMGEK EWYFFSLRDR KYPTGLRTNR ATGAGYWKAT GKDREVVAAA 120 AGGGALIGMK KTLVFYKGRA PRGEKTKWVL HEYRLDGDFA AARRSTKEEW VICRIFHKVG 180 DQYSKLMMMK SPASYYLPVS HHHPSSIFHD LPPVPFPNPS LVPFHHDLPT SFHPPLLQHS 240 HANSKNSSSN NGGFVFPNEP NTTNSSDNHI SCNGAMAAAA AAFPSFSCVS TVTGKGGPPA 300 QLGVNAGQQE PPPPTWMDAY LQHSGFIYEM GPPAVPRGA |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G76420.1 | 1e-81 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | ONIVA08G22710.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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