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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | ONIVA08G16830.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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| Family | NAC | ||||||||
| Protein Properties | Length: 335aa MW: 36781.5 Da PI: 5.635 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 151.2 | 5.1e-47 | 7 | 140 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka...eekewyfFskrdkkyatgkrknratksgyWkat 86
lp+GfrF Ptdeelv++yL++k+ + +++ +i++vd+y+++Pw+Lp + + + e+yfF++r++ky++g r +rat+ gyWk+t
ONIVA08G16830.1 7 LPAGFRFFPTDEELVTYYLARKAMDATFTS-AAIRDVDLYTSDPWHLPCdssaaS--TgggGGGECYFFCRRSSKYPSGARVRRATAGGYWKST 97
799************************999.78**************94355431..13334559***************************** PP
NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
gkdk v+++ +g lvg+kktLvfy+grap+gekt+Wvmhey+
ONIVA08G16830.1 98 GKDKGVYAAaaGGGLVGTKKTLVFYEGRAPRGEKTSWVMHEYS 140
*******99888999***************************7 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 335 aa Download sequence |
MEEEQRLPAG FRFFPTDEEL VTYYLARKAM DATFTSAAIR DVDLYTSDPW HLPCDSSAAS 60 TGGGGGGECY FFCRRSSKYP SGARVRRATA GGYWKSTGKD KGVYAAAAGG GLVGTKKTLV 120 FYEGRAPRGE KTSWVMHEYS RAPSTNFIRG AQARTHNLLD IIYSEWVICR VFKKQPPIEH 180 WLEMEQEVET TTTTTTVQEH TPNRRRLPPA EAAAAAPPPS GQPWQHTSRR SGDGRAAIDG 240 GNREEEEDEH GLAREESSSP VVISSPSRCT SSPSSRLLNH EHLGASSSDD LPELMEFGDI 300 YGGIAAGGPT DQQASSSNSN SICNFLDEPY YCWNF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G61430.1 | 1e-42 | NAC family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | ONIVA08G16830.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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