PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA08G16810.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 357aa MW: 39826.5 Da PI: 6.5844

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G16810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.4	7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl ONIVA08G16810.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53	7.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l ONIVA08G16810.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPVTHKAIN GTLNNTAGDK SAKVTASLSH MAQWESARLE AEARLARESK MRIAASTPSK 180 LHAQSTNPPA STPSPCFDVL NAWQSAKIDL ESPTSTLTFA GSNASMLPFS TTTALELSES 240 NSNVWQQRSD ELEGEESEWK FVSKQQLQGM HGKETEEHFI GCEESWFPGT ANIGAGFTGM 300 LLDGSNMHDT SECWDESSNG QDEQRSQVSE DAENKNYWNG IFSMVNSEQP PLQPPLL

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MGRSPCCEKI GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PSKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPVTHKAIN GTLNNTAGDK SAKVTASLSH MAQWESARLE AEARLARESK MRIAASTPSK  180
LHAQSTNPPA STPSPCFDVL NAWQSAKIDL ESPTSTLTFA GSNASMLPFS TTTALELSES  240
NSNVWQQRSD ELEGEESEWK FVSKQQLQGM HGKETEEHFI GCEESWFPGT ANIGAGFTGM  300
LLDGSNMHDT SECWDESSNG QDEQRSQVSE DAENKNYWNG IFSMVNSEQP PLQPPLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-100	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G16810.1