PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA08G16750.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bHLH
Protein Properties Length: 352aa    MW: 36589 Da    PI: 6.2758
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA08G16750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.81.1e-14130176354
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r+h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L +++e++k+L
  ONIVA08G16750.1 130 RSHSEAERRRRQRINGHLARLRSLLPNT-----TKTDKASLLAEVIEHVKEL 176
                      78*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MWEAVGGGDG TALLPWPGSA AAATTSGAAA PLYMPPAAAA AAPFAAGEQL PVEQPFYFDG  60
GGGVAGHNHH PHHHQYGMEA PPPLTMMQMG GGGSSSSRMV VSGLLGTLQA ELGRMTAKEI  120
MDAKALAASR SHSEAERRRR QRINGHLARL RSLLPNTTKT DKASLLAEVI EHVKELKRQT  180
SAMMEDGAAG GEAAAAPVVL LPTEDDELEV DAAADEGGRL VARASLCCED RADLIPGIAR  240
ALAALRLRAR RAEIATLGGR VRSVLLIAAV EEEDPDEAGN DDDGEHGYGV AASHRRHELV  300
ASIHEALRGV MNRKAASSDT SSSGAGGGGG SIKRQRMISA HDQQGSFNSS GW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.19e-39bHLH family protein