PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA08G16390.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 464aa MW: 46864.8 Da PI: 7.5431

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G16390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.6	5.1e-32	265	318	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ ONIVA08G16390.1 265 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 318 9****************************************************7 PP
2	Myb_DNA-binding	46.7	7.3e-15	266	317	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ ONIVA08G16390.1 266 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 317 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MASATSTTPD LSLHISLPSG GAAVGTTAPP GLGNGGAVGG AGGGKAAGGG DPWRRLDGST 60 ASTELSLSTP QQQQEGSTSA ADVLPWRLRQ PTAAAASVPV TLPTIPMDGS AAAARAPIRG 120 VPVYSGGGGG GHPFLGGGGG DHRHNRLYNP YHSTAWPSSS LCSTSPAPAP PPPPAALDPT 180 TSSLLSPSAY HRMLSSTGRL HGVLADTLRG YAGAAAVAGS IGYGSAAAAA AAMGGYGGAG 240 AGGGFASSRF MPRLLPASRR SIRAPRMRWT SSLHARFVHA VELLGGHERA TPKSVLELMD 300 VKDLTLAHVK SHLQMYRTVK STDKPAAASG PMDGSGSGSG SGDDELLAGD GRQATSSGAD 360 ADRRMSFTEH RSSSEGAASH AGGGGDGDCS SSAVNSDTIR ARSNSPRDLW LSSSVCNMDP 420 QHLVTVEDME PCRSSSLQVS SHELSSPSLE FTLGRPSWHS IDHD

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MASATSTTPD LSLHISLPSG GAAVGTTAPP GLGNGGAVGG AGGGKAAGGG DPWRRLDGST  60
ASTELSLSTP QQQQEGSTSA ADVLPWRLRQ PTAAAASVPV TLPTIPMDGS AAAARAPIRG  120
VPVYSGGGGG GHPFLGGGGG DHRHNRLYNP YHSTAWPSSS LCSTSPAPAP PPPPAALDPT  180
TSSLLSPSAY HRMLSSTGRL HGVLADTLRG YAGAAAVAGS IGYGSAAAAA AAMGGYGGAG  240
AGGGFASSRF MPRLLPASRR SIRAPRMRWT SSLHARFVHA VELLGGHERA TPKSVLELMD  300
VKDLTLAHVK SHLQMYRTVK STDKPAAASG PMDGSGSGSG SGDDELLAGD GRQATSSGAD  360
ADRRMSFTEH RSSSEGAASH AGGGGDGDCS SSAVNSDTIR ARSNSPRDLW LSSSVCNMDP  420
QHLVTVEDME PCRSSSLQVS SHELSSPSLE FTLGRPSWHS IDHD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	42	50	GGGKAAGGG
2	43	51	GGGKAAGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-38	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G16390.1