PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA08G05080.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 388aa MW: 44037.2 Da PI: 8.2339

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA08G05080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.5	8.9e-17	31	111	9	95
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 + ++ +++pk+f+++ +g+ + +++le+++ +s +v++ +k+++++++t+GW +Fvk +L+ gD+++F+++g+s+f v ONIVA08G05080.1 31 MGDFQHEMIIPKEFVQRLKGD--IPGEIQLETRNRNSHTVRV--DKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQF--DVI 111 5556788******999888..5558***********..*******************************99999..554 PP
2	B3	42.2	1.4e-13	301	384	10	99
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++ + l++ +++++++ ++ +kt++ ++ g +W+++l + +sg + +G ++F+++n++ +gD+++F+l ++++ +++v+++r+ ONIVA08G05080.1 301 SGRISSLSIANRYVDNYLQD---EKTIR-LSRLGDKWNIRL--SDSSGNRRMVGGCRKFAEDNDVGVGDICLFELLKNHKCTMKVHIIRA 384 5566789*****888433...34788.56799***..77777777889*****************9998888**9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MGTSCERCRR RDEQDYRNLD DSQKHFLLTM MGDFQHEMII PKEFVQRLKG DIPGEIQLET 60 RNRNSHTVRV DKTQEKVIFT EGWAQFVKTF DLQMGDSMMF RFNGNSQFDV IIVDQIGREK 120 ACSAVVDDSQ NPNVQERRVD ATETLNSSRA HSQPMPMQST TETVNHSHAR PCPMHTAVDC 180 MPLSHAHPQP MPMQFPTETV NHCHAPTGPM EMPLENVALS HAHARPLQMQ SQPTDRLTQV 240 QRGYSLSSKD QDCRVGVIPD PIIGQKTILS RVQVNVVKRK IQNIGSQIPI FVSVIGKNNA 300 SGRISSLSIA NRYVDNYLQD EKTIRLSRLG DKWNIRLSDS SGNRRMVGGC RKFAEDNDVG 360 VGDICLFELL KNHKCTMKVH IIRAKDIC

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MGTSCERCRR RDEQDYRNLD DSQKHFLLTM MGDFQHEMII PKEFVQRLKG DIPGEIQLET  60
RNRNSHTVRV DKTQEKVIFT EGWAQFVKTF DLQMGDSMMF RFNGNSQFDV IIVDQIGREK  120
ACSAVVDDSQ NPNVQERRVD ATETLNSSRA HSQPMPMQST TETVNHSHAR PCPMHTAVDC  180
MPLSHAHPQP MPMQFPTETV NHCHAPTGPM EMPLENVALS HAHARPLQMQ SQPTDRLTQV  240
QRGYSLSSKD QDCRVGVIPD PIIGQKTILS RVQVNVVKRK IQNIGSQIPI FVSVIGKNNA  300
SGRISSLSIA NRYVDNYLQD EKTIRLSRLG DKWNIRLSDS SGNRRMVGGC RKFAEDNDVG  360
VGDICLFELL KNHKCTMKVH IIRAKDIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA08G05080.1