PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G22680.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB
Protein Properties Length: 338aa    MW: 35087.8 Da    PI: 6.1552
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G22680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.81.1e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd+ lv +v+++G+g+W++++ + g+ R+ k+c++rw +yl
  ONIVA07G22680.1 14 KGPWTPEEDLVLVSYVQEHGPGNWRAVPTRTGLMRCSKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding51.22.9e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +E++l+v++ ++lG++ W++Ia++++  Rt++++k++w+++l
  ONIVA07G22680.1  67 RGNFTDQEEKLIVHLQALLGNR-WAAIASYLP-ERTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MVRPPCCDKD GVKKGPWTPE EDLVLVSYVQ EHGPGNWRAV PTRTGLMRCS KSCRLRWTNY  60
LRPGIKRGNF TDQEEKLIVH LQALLGNRWA AIASYLPERT DNDIKNYWNT HLKRKLQGGG  120
DGDGGAAGDA VSPKPAAQRP ASSSKGQWER RLQTDIDMAR RALREALTSL DDVKPPHQPD  180
AANAAAGGGG ATTGAAASAG ADSPAASSTS GASQCSPSSA GYVLTTENIS RMLDGWARKK  240
GGGGGRRAAG SGPATPGATE SASGSSEASE VSYGGTALSA AAAPASAFEY ETKPTVTAAA  300
AADAADETQL SAIESWLFAD ADGIESGSLL DAAMDYTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-90MYB family protein