PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G05990.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 457aa MW: 49305 Da PI: 5.9891

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G05990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.9e-17	104	150	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde l + v+ +G++ W+ Ia+ ++ gR +kqc++rw ++l ONIVA07G05990.1 104 KGGWTREEDEVLRQMVRHHGNRKWAEIAKSLP-GRVGKQCRERWTNHL 150 688***************************.**********996 PP
2	Myb_DNA-binding	51.9	1.7e-16	158	198	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd l++a++ +G+ W++Ia++++ gR+++ +k++w+ ONIVA07G05990.1 158 IWTEEEDMMLIEAHQTYGNS-WSAIAKRLP-GRSENTIKNHWN 198 6***************99.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MAAAGNSFLN QELVKAADGH LSSSSHGGTC HTNTRAAPIT VGVPDLGCPV SSIGVATSSS 60 LTPKEGLATA SYNSVVAFPV GATMVPQQQQ TQAAGSNDNP GLVKGGWTRE EDEVLRQMVR 120 HHGNRKWAEI AKSLPGRVGK QCRERWTNHL HPDIKKDIWT EEEDMMLIEA HQTYGNSWSA 180 IAKRLPGRSE NTIKNHWNAT KRSLNSKRRL RKKNSEETVP GQPSLLENYI RSCQHMLPSE 240 IAPPPPAPPA PFDISRYGNS GVIGASPIVP VVQEPSTSTP PGLVMFLDLL NQAIPHPPQP 300 ETMDLFNMTP EVSHLNTSGY CLQLDAGGNL YYGQLPAPAP VQPHGINTQE LQDTPHLSLY 360 YPLSSFAGSH TDGTVEFDHQ LSNPDGGHYG EEAGPSSVAA GGSANGMDDN DVVQMASNQF 420 MMPSEDEGNS FLNQELLMVV NNMTDSHIMR SHGGASY

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MAAAGNSFLN QELVKAADGH LSSSSHGGTC HTNTRAAPIT VGVPDLGCPV SSIGVATSSS  60
LTPKEGLATA SYNSVVAFPV GATMVPQQQQ TQAAGSNDNP GLVKGGWTRE EDEVLRQMVR  120
HHGNRKWAEI AKSLPGRVGK QCRERWTNHL HPDIKKDIWT EEEDMMLIEA HQTYGNSWSA  180
IAKRLPGRSE NTIKNHWNAT KRSLNSKRRL RKKNSEETVP GQPSLLENYI RSCQHMLPSE  240
IAPPPPAPPA PFDISRYGNS GVIGASPIVP VVQEPSTSTP PGLVMFLDLL NQAIPHPPQP  300
ETMDLFNMTP EVSHLNTSGY CLQLDAGGNL YYGQLPAPAP VQPHGINTQE LQDTPHLSLY  360
YPLSSFAGSH TDGTVEFDHQ LSNPDGGHYG EEAGPSSVAA GGSANGMDDN DVVQMASNQF  420
MMPSEDEGNS FLNQELLMVV NNMTDSHIMR SHGGASY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-46	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G05990.1