PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G05980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 178aa MW: 20640.6 Da PI: 10.1077 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 1e-15 | 14 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEde l + v+ +G W+ Ia+ ++ t+kqc++rw ++l ONIVA07G05980.1 14 KGGWTREEDEVLRQMVRHHGDCKWTEIAKSLP-SQTGKQCRERWTNHL 60 688*****************************.************996 PP | |||||||
2 | Myb_DNA-binding | 38.6 | 2.5e-12 | 67 | 105 | 6 | 46 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +eE+ +l+++++ +G++ W++I r ++ gR+++ +k++w+ ONIVA07G05980.1 67 EEEHMKLIEVHRTYGNR-WSAIVRWLP-GRSENTVKNHWNL 105 7****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MQVAGSNDNL GLIKGGWTRE EDEVLRQMVR HHGDCKWTEI AKSLPSQTGK QCRERWTNHL 60 YSEIKIEEEH MKLIEVHRTY GNRWSAIVRW LPGRSENTVK NHWNLTKRSL NSKQRLRKKN 120 SEKAVPRQPS HLEEYICSFQ NPLLNETAPS PLAPPAPFDI VRYGTSRLIV VIPTPLVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 2e-36 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G05980.1 |