PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G29400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 410aa MW: 43820.5 Da PI: 6.8241 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.6 | 3.8e-15 | 36 | 83 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+lv + + G g+W+ +ar g+ R++k+c++rw +yl ONIVA05G29400.1 36 KGLWSPEEDEKLVAYMLRSGQGSWSDVARNAGLQRCGKSCRLRWINYL 83 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 89 | 132 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v++++ lG++ W+ Ia++++ gRt++++k++w++ ONIVA05G29400.1 89 RGAFSPQEEDLIVNLHAILGNR-WSQIAARLP-GRTDNEIKNFWNS 132 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MRKPDCGGGG GAAKGGGVLG VAGGNNAAVV GGKVRKGLWS PEEDEKLVAY MLRSGQGSWS 60 DVARNAGLQR CGKSCRLRWI NYLRPDLKRG AFSPQEEDLI VNLHAILGNR WSQIAARLPG 120 RTDNEIKNFW NSTIKKRLKI SSSSASPATT TDCASPPEHK LGAVVDLAGG GGATDDVVVG 180 TANAAMKSMW VDSSSSSSSS SSSMQSRPSI MAAAAAGRSY GGLLPLPDQV CGVDTSPPPP 240 FFHDHSISIK QAYYGSTGAH HHHHAIAAMD GSSLIGDHHH HSSSILFGGA SVPPLLDHQT 300 ILDDDDDHPN KTGSNTTAAT LSSNITDNSN SNKNNSDNNN NISSSCCISL MNSSSNMIYW 360 EGHHQQQQQQ QHQMLQQQQQ HMSRNVMGEW DLEELMKDVS SLPFLDFQVE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 4e-64 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G29400.1 |