PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G19570.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB
Protein Properties Length: 314aa    MW: 33903 Da    PI: 6.8463
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G19570.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.4e-083781244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+W++eE + + +a + l  +   +W+++a  ++ g+t  ++  ++
  ONIVA05G19570.1 37 GAWSQEENKVFEQALAALDRNdpeRWERVALLLP-GKTVADVMTHY 81
                     79*****************99*************.********999 PP
2Myb_DNA-binding45.71.5e-14151195347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G g+W+ I+r + + Rt+ q+ s+ qky
  ONIVA05G19570.1 151 PWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKY 195
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMESYMEVLP PAPAHYFVGQ AAAAGGWFLP DRRGGGGAWS QEENKVFEQA LAALDRNDPE  60
RWERVALLLP GKTVADVMTH YDDLENDVCF IEAGLVPFPH YGAAGGGGGS GFTLDWDGGD  120
DPAGLGFKRS CYMVGGKRAR GPDQERKKGV PWTEEEHKLF LMGLKKYGRG DWRNISRNFV  180
TSRTPTQVAS HAQKYFIRLN SGGKDKRRSS IHDITTVNLP DDDHGNPSPS PPPSVLTAHS  240
SSSAAAVSEQ FGVLVDGKPP PPPLGRGAGH HHFMPHPYAQ VKIEAGNSHV AGGGRLDDSV  300
LVQMQCGQLM QPLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-81MYB family protein