PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G17670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 337aa    MW: 36244.1 Da    PI: 8.5542
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G17670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1645.3e-51181421128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelv++yL+++++g ++ +  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk+v +
  ONIVA05G17670.1  18 LPPGFRFHPTDEELVMHYLCRRCAGLPIAV-PIIAEVDLYKFDPWHLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGT 110
                      79**************************99.88***************7666789*************************************99 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + v +kk Lvfy g+apkg kt+W+mheyrl
  ONIVA05G17670.1 111 --PRPVAIKKALVFYAGKAPKGDKTNWIMHEYRL 142
                      ..779***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSGGGEGVAA AERQELQLPP GFRFHPTDEE LVMHYLCRRC AGLPIAVPII AEVDLYKFDP  60
WHLPRMALYG EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPVGT PRPVAIKKAL  120
VFYAGKAPKG DKTNWIMHEY RLADVDRSAR KKNTLREYLS RSININMNLD DWVLCRIYNK  180
KGGVEKPSGG GGGGGERSNM MSHGETASAG SPPEQKPAVL PPPPPPYAAA APFSELAAFY  240
DVRPSDSVPR AHGADSSCSE HVLTTSASSG GVVERPEVQS QPKIAEWERT FAGAAAPAGA  300
VSTAGPILGQ LDPAAAAVAG GGDPLLQDIL MYWGKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-106NAC family protein