PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA05G12010.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HB-other

Protein Properties

Length: 127aa MW: 14393.8 Da PI: 9.5345

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G12010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.3	2.3e-17	3	52	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t++qle+L++ + ++ yp+++ r+eL+ klgLt++q ++WF+ rR k++k ONIVA05G12010.1 3 TPYQLEVLKRTYTEDLYPNETIRAELSVKLGLTDKQLQMWFCHRRLKDRK 52 89**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MKTPYQLEVL KRTYTEDLYP NETIRAELSV KLGLTDKQLQ MWFCHRRLKD RKPPPKRQQL 60 EEDVHVPVMA PPPVLPPPLP HSKLTMAPGG MYGEQLLPSS SRRGTGRPSA ILDMSDLQCL 120 PLLTSHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	2e-17	HB-other family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G12010.1