PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G02580.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 427aa MW: 47151.6 Da PI: 6.567

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G02580.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l + ++++G g+W+++++ g+ R++k+c++rw +yl ONIVA05G02580.1 14 KGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	47.1	5.6e-15	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++++eE++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w++ ONIVA05G02580.1 67 RGAFSQEEEDLIIELHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110 89******************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG 120 IDPNTHKPLT EADRRGAAPT VSTERTSGSS DVNPSSAGAL GNLSHLLSET AQSSMLLPVY 180 DKNHPETASL PRPKVPPKEL FLDQLTAGHE SPSSCRSSGP TLYFPFQQPL GYSNECGTGD 240 GASMNSLWFN QNDFNCSTIS TVMPPVSPSA LSTSMGLNLP PENPRHGGTG IGNTPFYWDG 300 SNPSSSGSTG SSGSNSMGFE PQSTTSILEN SVFPWTDIGQ EKDTRVHLVE ELKWPDLLHG 360 TFAEATTAMQ NQSQSLYDDV IKAESQFNME GICASWFQNQ QPQQQLQAAS DMYDKDLQRL 420 PLSFEHI

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SQEEEDLIIE LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CIKKKLRQKG  120
IDPNTHKPLT EADRRGAAPT VSTERTSGSS DVNPSSAGAL GNLSHLLSET AQSSMLLPVY  180
DKNHPETASL PRPKVPPKEL FLDQLTAGHE SPSSCRSSGP TLYFPFQQPL GYSNECGTGD  240
GASMNSLWFN QNDFNCSTIS TVMPPVSPSA LSTSMGLNLP PENPRHGGTG IGNTPFYWDG  300
SNPSSSGSTG SSGSNSMGFE PQSTTSILEN SVFPWTDIGQ EKDTRVHLVE ELKWPDLLHG  360
TFAEATTAMQ NQSQSLYDDV IKAESQFNME GICASWFQNQ QPQQQLQAAS DMYDKDLQRL  420
PLSFEHI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09540.1	7e-90	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G02580.1