PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G02030.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family TALE
Protein Properties Length: 311aa    MW: 33348.2 Da    PI: 5.0141
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G02030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.92e-092442772255
                      SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
         Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                       +yp++e++ +LA+ +gL+ +q+ +WF N+R ++
  ONIVA05G02030.1 244 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 277
                      59*****************************885 PP
2ELK33.11.2e-11197218122
              ELK   1 ELKhqLlrKYsgyLgsLkqEFs 22 
                      ELK++Ll+KYsg+L+ L++EF+
  ONIVA05G02030.1 197 ELKEMLLKKYSGCLSRLRSEFL 218
                      9********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEDLYSIHPG ISRGGGGGGG GAASEASGVA GGGSSPPHPP PPATTAAAAD LTELMKAQIA  60
GHPSYPSLLS AYIECRKVGA PPEVTTLLEE IGREGRGGGG GATAGGEIGL DPELDEFMET  120
YCRVLERYKE ELTRPFDEAA SFLTGIHTQL ASLCGGAPPP TDNSDEMVGS SEDEPCSGDA  180
DAADFGQEHS SRLADHELKE MLLKKYSGCL SRLRSEFLKK RKKGKLPKDA RSALMDWWNT  240
HYRWPYPTEE DKVRLAAMTG LDPKQINNWF INQRKRHWKP SEDMRFALME GVTGGSSSGT  300
TLYFDTGTIG P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213222LRSEFLKKRK
2219223KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.13e-78TALE family protein