PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G01120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 286aa MW: 32164.4 Da PI: 7.1025 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.8 | 2.9e-14 | 57 | 104 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv v+++G ++W+ a+ g++Rt+k+c++rw +yl ONIVA05G01120.1 57 KGPWTEQEDVQLVWFVRLFGERRWDFLAKVSGLKRTGKSCRLRWVNYL 104 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 110 | 155 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr T++E+ l+++++ q+G++ W++Iar ++ gRt++++k++w++++ ONIVA05G01120.1 110 RGRITADEERLILHLHSQWGSR-WSRIARSLP-GRTDNEIKNFWRTHM 155 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence |
MVVKKAATMA EAEAEEEMMM RMMCGSGGNE MMKTKMKKKN REGEEEEEVS GGGRMRKGPW 60 TEQEDVQLVW FVRLFGERRW DFLAKVSGLK RTGKSCRLRW VNYLHPGLKR GRITADEERL 120 ILHLHSQWGS RWSRIARSLP GRTDNEIKNF WRTHMRKIAH HAKKKTNSPS PAPTTSSGSL 180 SSSLTTATTT MATAAALQES SSCGGDDEAV DQLVAAATTP ASQLLTMDYT MDQLWNDIAA 240 AEADTSCYDA AAMASPPSPV WEFCTDYSLW RIDDEEYYKK MLDASQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59780.3 | 1e-61 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G01120.1 |