PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA04G28090.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 433aa MW: 48669.4 Da PI: 8.3688

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G28090.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.6	5.5e-19	299	394	3	95
EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 k+lt+sdv++ gr+v+pk+ ae+h + ++e+++l++ d + +W++k+++ ++ks++yvl+ + +Fvk++gL++gD+++++ + +++++ ONIVA04G28090.1 299 KELTNSDVGNIGRIVMPKRDAEAHlpALHQREGVMLKMDDfKLETTWNFKYRFwpNNKSRMYVLE-STGGFVKQHGLQTGDIFIIYKS-SESEK 390 89**********************888999****7778***998999999999.9*******************43.37777 PP .EEE CS B3 92 lvvk 95 lvv+ ONIVA04G28090.1 391 LVVR 394 7776 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MADTRGSTSS GGGDDRGREG HDDFTGGGQY NKYHRILEAV PSPLVRRENV VHHQYPTGLI 60 HHPSSTMPVA PCSYVPRYTM VPTSAMLPLQ HHHRQLQISQ ENFQDRVPSN NVAAPHLPSN 120 FQDLRPMCNG PPFMSYGQTA SNRNVLYQNL TPYSFNAWAS NNMPRNPVYT SYHPTAIEDP 180 HATPFHINNH DTDQGFFTVS TSFRVDQSFV HAPSPFPPVS SSSRSFSSAQ ISNGPTDAKK 240 AKKSDIKDQP IVLRRSDTES EKNDELDQTP ASEPSSMSHN SANSTIRFNC REYRVILRKE 300 LTNSDVGNIG RIVMPKRDAE AHLPALHQRE GVMLKMDDFK LETTWNFKYR FWPNNKSRMY 360 VLESTGGFVK QHGLQTGDIF IIYKSSESEK LVVRGEKAIK PNVIMPIVDC SCKNDLNNSE 420 ECGFAISLLT KKT

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MADTRGSTSS GGGDDRGREG HDDFTGGGQY NKYHRILEAV PSPLVRRENV VHHQYPTGLI  60
HHPSSTMPVA PCSYVPRYTM VPTSAMLPLQ HHHRQLQISQ ENFQDRVPSN NVAAPHLPSN  120
FQDLRPMCNG PPFMSYGQTA SNRNVLYQNL TPYSFNAWAS NNMPRNPVYT SYHPTAIEDP  180
HATPFHINNH DTDQGFFTVS TSFRVDQSFV HAPSPFPPVS SSSRSFSSAQ ISNGPTDAKK  240
AKKSDIKDQP IVLRRSDTES EKNDELDQTP ASEPSSMSHN SANSTIRFNC REYRVILRKE  300
LTNSDVGNIG RIVMPKRDAE AHLPALHQRE GVMLKMDDFK LETTWNFKYR FWPNNKSRMY  360
VLESTGGFVK QHGLQTGDIF IIYKSSESEK LVVRGEKAIK PNVIMPIVDC SCKNDLNNSE  420
ECGFAISLLT KKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	3e-36	B3 family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G28090.1