PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G19740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 368aa MW: 39587.4 Da PI: 4.6807 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 6.9e-17 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G +W++ ++ g+ R++k+c++rw +yl ONIVA04G19740.1 16 KGSWTPEEDMRLVAYIQKYGHANWRALPKQAGLLRCGKSCRLRWINYL 63 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.5e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e +++++ +lG++ W++Ia++++ gRt++++k+ w+++l ONIVA04G19740.1 69 RGNFTAEEEETIIKLHGLLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MGKGRAPCCA KVGLNKGSWT PEEDMRLVAY IQKYGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTAEEEETI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRVSP 120 EQKKGGGKSK KKTTCTDVLV PSPSPSSSTT TTTNCSSGDS AGEQSNTSKE EEEETDKIEI 180 PMLELDPCCF DFDMLVDPVV PDTYCPAMSA SASASAPTSP CSSTSPSCAR AGVDPLLDLP 240 EIVDLGPELW SIMDGGAGDG CTEAPPPAWS NAAAANATVA TTTSLEEEEG KEWWLEDLEK 300 ELGLWGPTDD YHCHPGPQGQ PGRAGPPPSA VVEDPVSCYF QAGPTAAATW QGHEPSAVIT 360 SNPMDYYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 3e-69 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G19740.1 |