PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G17140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 262aa MW: 28331.8 Da PI: 7.0035 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.7 | 2.3e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEd+ lv ++++G g+W++ ++ g+ R++k+c++rw +yl ONIVA04G17140.1 14 KGPWTTEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.1e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++++lG++ W++Ia++++ gRt++++k+ w++yl ONIVA04G17140.1 67 RGNFSKEEEDTIIHLHELLGNR-WSAIAARLP-GRTDNEIKNVWHTYL 112 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGRAPCCEKM GLKKGPWTTE EDKVLVAHIQ RHGHGNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF SKEEEDTIIH LHELLGNRWS AIAARLPGRT DNEIKNVWHT YLKKRLDAPA 120 QGGHVAASGG KKHKKPKSAK KPAAAAAAAP PASPERSASS SVTESSMASS VAEEHGNAGI 180 SSASASASAS VCAKEESSFT SASEEFQIDD SFWSETLSMP LDGYDVSMEP GDAFVAPPSA 240 DDMDYWLGVF MESGEAQDLP QI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-73 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G17140.1 |