PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G15310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 523aa MW: 55501.8 Da PI: 4.9905 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.7 | 9.8e-17 | 56 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed lv+ v+q+G g+W+++ r+ g+ R++k+c++rw ++l ONIVA04G15310.1 56 KGPWTTAEDAVLVQHVRQHGEGNWNAVQRMTGLLRCGKSCRLRWTNHL 103 79******************************99***********996 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.7e-16 | 109 | 152 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++++E++l++++++qlG++ W++ a++++ gRt++++k++w++ ONIVA04G15310.1 109 KGSFSPDEELLIAQLHAQLGNK-WARMASHLP-GRTDNEIKNYWNT 152 799*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
MEEMIKPALA PASSEEEKEV VATAATGERR HEEATAGREE QEEEEEEEEA PVVLKKGPWT 60 TAEDAVLVQH VRQHGEGNWN AVQRMTGLLR CGKSCRLRWT NHLRPNLKKG SFSPDEELLI 120 AQLHAQLGNK WARMASHLPG RTDNEIKNYW NTRTKRRQRA GLPVYPPDVQ LHLAFAKRCR 180 YDDFSSPLSS PQQSAGSNVL SMDAADAAGA ASSGYTSARP PPLDLAGQLA MGSRPVQLLA 240 ATPFSAPSSP WGKPFARNAQ FFQFPHSSPV SPTTPTGPVQ VHPVTPELSL GYGLHAGDRA 300 RLPPVSPSPG ARAELPSSQL RPSMAPTTAA AAATGGLVGG ALQDHPNAAS LEAMLQELHD 360 AIKIEPPAPP ENRGTEEEGG GGGGNLRGFL HEQIFDKLMP IKSGDFCIVG LHSVLISLQF 420 PGDGKPEVEL KDDIETLFDL IIPATFPAAA PEPAAAATAA SAAPNHSSSV SQHSSDDQDH 480 SNGADVVLDL PILTGGGGGS SEQDDWSLDG AACQWDNISG GIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 8e-66 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G15310.1 |