PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA04G10650.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 810aa MW: 91692.9 Da PI: 6.745

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA04G10650.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.7	2.7e-50	440	568	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppGfrFhPtd el v+yLk+k+ gk+l++ ++++e+d+yk+ PwdLp k +++++++ewyfF++rd+ky++g+r+nr+t++gyWkatgkd++v ONIVA04G10650.3 440 LPPGFRFHPTDVELTVYYLKRKLLGKHLRC-NAVSELDLYKFAPWDLPeKsSLQSKDREWYFFCPRDRKYSSGSRTNRSTEAGYWKATGKDRPV 532 79**************************.89**********95357788999******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + ++++vg+k+tLvf+ g+ p+g +tdWvm eyrle ONIVA04G10650.3 533 IY-NSQTVGMKRTLVFHLGKPPRGDRTDWVMYEYRLE 568 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 810 aa Download sequence
MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY 60 AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY 120 VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR 180 SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR 240 AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL 300 RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM 360 IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH 420 EWRTPYRQRS ILLSMAKTSL PPGFRFHPTD VELTVYYLKR KLLGKHLRCN AVSELDLYKF 480 APWDLPEKSS LQSKDREWYF FCPRDRKYSS GSRTNRSTEA GYWKATGKDR PVIYNSQTVG 540 MKRTLVFHLG KPPRGDRTDW VMYEYRLEDK ELSASGVKLD ACVLCKIFQK SGPGPKIGEQ 600 YGAPFNEDDW NEANGELSSF AFSVPPCALE SSNGRLNTAG QQLAVSDNIG SSLDHCSETN 660 DKIAVGGCGT TSPSVPFDTI HTQQLAEIIS CFSTDLLNSV SRDGSLPDST ADYDNDNEVS 720 SDDGEAIFNE LDELDSQSDE SISNHCNSCG EDLIPPTLEV LKTEQYLELN DLSFSLADDP 780 DPCNLLLTTN LSDQNHPELE TSSNRKALRL

Sequence ? help Back to Top

Protein Sequence Length: 810 aa Download sequence

MRSSHQPLCT RAHQAAALLL VAATFFLTRL LDRSPLSAPP PPCAAPYSPW PHRDLRIYVY  60
AEDEVDGLRA LLRGRNDDVT AATCIKGQWG TQVKIHQLLL SSRFRTFDKD EADLFFVPTY  120
VKCVRMTGKL NDKEINQTYV KVVLSQMPYF RRSGGRDHIF VFPSGAGAHL FRSWATFLNR  180
SIILTPEGDR TDKRGISAFN TWKDIIIPGN VDDSMVKSDR LAVKPIPLTK RKYLANFLGR  240
AQGKVGRLQL VKLAKQYPDK LESPELKLSG PDKLGRIDYF KHLRNAKFCL APRGESSWTL  300
RFYESFFVEC VPVILSDEVE LPFQNVIDYT EVSIKWPASK IGPGLLEYLE SIPDGRVEEM  360
IGRGREIRCL WVYAADTERC SAMSAIMWEL QRKVRRFHQS AETFWLHNRS IVNRDLVEFH  420
EWRTPYRQRS ILLSMAKTSL PPGFRFHPTD VELTVYYLKR KLLGKHLRCN AVSELDLYKF  480
APWDLPEKSS LQSKDREWYF FCPRDRKYSS GSRTNRSTEA GYWKATGKDR PVIYNSQTVG  540
MKRTLVFHLG KPPRGDRTDW VMYEYRLEDK ELSASGVKLD ACVLCKIFQK SGPGPKIGEQ  600
YGAPFNEDDW NEANGELSSF AFSVPPCALE SSNGRLNTAG QQLAVSDNIG SSLDHCSETN  660
DKIAVGGCGT TSPSVPFDTI HTQQLAEIIS CFSTDLLNSV SRDGSLPDST ADYDNDNEVS  720
SDDGEAIFNE LDELDSQSDE SISNHCNSCG EDLIPPTLEV LKTEQYLELN DLSFSLADDP  780
DPCNLLLTTN LSDQNHPELE TSSNRKALRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	8e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA04G10650.3