PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA04G00840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 142aa MW: 16725 Da PI: 9.9985 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.9 | 4.7e-08 | 5 | 34 | 19 | 48 |
TTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqkyl 48 +G g+W++ ar+ ++Rt+k+c++rw++yl ONIVA04G00840.1 5 HGEGRWNALARCAWLKRTGKSCRLRWLNYL 34 9999**********99************97 PP | |||||||
2 | Myb_DNA-binding | 40.4 | 6.7e-13 | 40 | 83 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E++l+++++ +G++ ++Ia++++ gRt++++k++w++ ONIVA04G00840.1 40 RGNMTAQEQLLILELHGWWGNR-RSKIAQHLP-GRTDNEIKNYWRT 83 89********************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MLDCHGEGRW NALARCAWLK RTGKSCRLRW LNYLRPDVSR GNMTAQEQLL ILELHGWWGN 60 RRSKIAQHLP GRTDNEIKNY WRTRVQKHAK HLNCDVNSQQ FNDLMRYLWM PRLLDRIHRS 120 QSQSHDTDDA DLSAASCITV TA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G48000.1 | 3e-64 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA04G00840.1 |