PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G42340.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 316aa    MW: 34110.7 Da    PI: 4.6144
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G42340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.51.6e-2081541128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyat..gkrknratk......s 80 
                      l pG+ F+P+d+ lv+ +L++k+++ ++e  + i+++d+y+++P +L         ++++++ wyfF++ + ++++  + r++ra+       +
  ONIVA03G42340.1   8 LEPGYAFRPSDDGLVTLFLRPKIAKIPFEH-RLINHADVYSTDPAELVGehrpapGTHGSSRVWYFFCSPRYTSKRkaSGRRQRAVGgggggcE 100
                      579************************999.89**************733567665556778******98766654114466666443443335 PP

              NAM  81 gyWkatgkdkevlskkgelvglkktLvfy......kgrapkgektdWvmheyrl 128
                       +Wk+ g +k+v+ ++g+ vg  + + +       +g+a++ ++  W+m ey l
  ONIVA03G42340.1 101 NVWKSEGGKKAVIGADGRRVGYLQKFSYGvyesssSGSARSFTRLGWCMTEYGL 154
                      67********************999999666777779999999*********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDDDEIALEP GYAFRPSDDG LVTLFLRPKI AKIPFEHRLI NHADVYSTDP AELVGEHRPA  60
PGTHGSSRVW YFFCSPRYTS KRKASGRRQR AVGGGGGGCE NVWKSEGGKK AVIGADGRRV  120
GYLQKFSYGV YESSSSGSAR SFTRLGWCMT EYGLDDDAID GADKQVLCKV YRSPRAVCAE  180
ARTAAAKCSG SKRKADDGAD HPEAPPSARP RQEEAGSEHD EQPELPPELD LDALLSAPMD  240
ENLESTFSTA ATEQYMRYLM NDEPLPWAPT MDPVDGGAGG GDEFIQTANG PCMDGEVFAR  300
LAAGETLDDI LGSTSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-13NAC family protein