PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G41700.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 366aa    MW: 41904.1 Da    PI: 6.5097
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G41700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.43.5e-15381201498
                      T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..EEEEE- CS
               B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelvvkvfr 98 
                      + +++p k a++++g+ ++     l+ +sg++W+v +  +k  ++ +l +GW++F+ka++L+e+D + F+ +gr   +f++ v +f+
  ONIVA03G41700.1  38 HGISIPEKVADRFSGQITK--GFNLKAPSGETWRVSV--EKVADELILMSGWEDFAKAHELQENDLLFFTCNGRcnGSFSFDVLIFD 120
                      459**********888555..59999***********..*******************************99874455666666665 PP
2B342.71e-13260356198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                      f++vl  +  +++g+l++p  fa++h  +  +s+++ l+   + ++W vk+ +  + +++  +  W +F ++n+L+eg +++F+l++  ++ ++
  ONIVA03G41700.1 260 FVTVLQAPQIHRKGLLIVPSGFAADHLDS--RSQEILLMRpNKKEKWYVKYYHASTTRGFNCQ-RWIKFIRENRLREGYICIFELMKGaRRVTM 350
                      788888999999**************544..44566666637779******556666666666.9*******************9977799999 PP

                      EEEEE- CS
               B3  93 vvkvfr 98 
                      +v+v+ 
  ONIVA03G41700.1 351 TVHVIG 356
                      999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MGEKGCESCR EWQEHCYREH MDVSRIRFFR LMTGDFAHGI SIPEKVADRF SGQITKGFNL  60
KAPSGETWRV SVEKVADELI LMSGWEDFAK AHELQENDLL FFTCNGRCNG SFSFDVLIFD  120
ASGCEKVSCF FIGKKNSIGG QTQNAEQYHL SDSEDTSTPS TFLVGSPHKA STSKKLNGKT  180
KTNPNKDDPF STGKEPEDPN SSRSHVKHEM IEEEKSDDDD EHADYEHADY YYSRFANYLT  240
GEEREEIFSL VSLQPGNPVF VTVLQAPQIH RKGLLIVPSG FAADHLDSRS QEILLMRPNK  300
KEKWYVKYYH ASTTRGFNCQ RWIKFIRENR LREGYICIFE LMKGARRVTM TVHVIGKVDD  360
RFVLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-24B3 family protein