PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G40170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 493aa    MW: 53125.7 Da    PI: 9.8417
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G40170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM86.35.9e-272754083128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleev.ikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr...atksgyWkatgk 88 
                      pG+rF Ptd+el+ ++Lk+k + ++ ++++ + ik++d++k++  +L+      k+ +  wy Fs+r++ +++g r+ r   +t+ gyWk+   
  ONIVA03G40170.1 275 PGVRFTPTDQELIIHFLKPKYNLRDaMPTNIIvIKQLDVCKLNLDELHGdlgLGKSLDGAWYVFSPRSRYKERGVRPARgikTTAVGYWKSNSA 368
                      9*******************9988875554445**************9534322334459*****************996534779******** PP

              NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +v++ +ge++g  ++L++  g++p+g+ t+W m+eyr+
  ONIVA03G40170.1 369 EADVVDDDGEVIGRVNSLTLALGHQPRGKATHWRMKEYRI 408
                      **************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 493 aa     Download sequence    
MAAINPVAGE VAAATAKAPP PAMATVRAPL PANHYLPYHS ASAAGSYAAN TQSTSSPVSP  60
ASPAMISSSS SSLPPQQQRT WQPQPTTFSQ ANPGHAYQQD HLPAVAGRRF FPPPAMQMQY  120
YHQQPAGVAM VGSGHPMAAP VHSSPLATTS GSNHAVVPDA PPQEPAKRRR RNTAAAATAR  180
WGRGRPRGAT ASSAHSAPPP PPQQQPTTSA PAITAQRNDD VNQEDDNQSS KNSAEEAVVV  240
AGGEPPAATS TLAIVPRHGD VGDADRPVSP YSDIPGVRFT PTDQELIIHF LKPKYNLRDA  300
MPTNIIVIKQ LDVCKLNLDE LHGDLGLGKS LDGAWYVFSP RSRYKERGVR PARGIKTTAV  360
GYWKSNSAEA DVVDDDGEVI GRVNSLTLAL GHQPRGKATH WRMKEYRIPH LLRMKVVKLK  420
LNSRGGTYKR TAYSLFPLDE WVLCKLYHSF AYKQKGKCKV HEEGSKSDRG VQDLSIDDDR  480
KTCDIEANKP NGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.17e-23NAC family protein