PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA03G33740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27539.5 Da PI: 8.1483 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 4 | 49 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l+++v+++G+++W++Ia++++ gR++k+c++rw++ ONIVA03G33740.1 4 RGHWRPSEDEKLKELVARYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 54.1 | 3.6e-17 | 56 | 99 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+ell+ ++ +G++ W+ Iar ++ gRt++ +k++w+ ONIVA03G33740.1 56 RSPFTEEEEELLLASHRAHGNR-WAVIARLFP-GRTDNAVKNHWHV 99 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MCTRGHWRPS EDEKLKELVA RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEELLLAS HRAHGNRWAV IARLFPGRTD NAVKNHWHVI MARRCRERMR LSNRRGGAAA 120 AGAAKGDESP ARISNGEKTA TRPPATNGSG MAMASLLDKY RRECGAAGLF AIGRHHNSKE 180 DYCSSTNEET SKSVEFYDFL QVNASSSDTK CGSSIEEQED NRDDDQAEGQ VQLIDFMEVG 240 TTSRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 7e-77 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA03G33740.1 |