PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G26150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 464aa    MW: 49701.5 Da    PI: 3.8811
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G26150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.81.2e-2471481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 
                      lppG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+   + +++ +e +fF+ ++ k+ +gkr++r +   g+W+ +    d e
  ONIVA03G26150.1   7 LPPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTPL-ADHTRGDEAFFFAGARAKNGKGKRQKRtVEGGGFWQGQRMavDGE 99 
                      79****************************999************953.33456789*******************555599**9665522222 PP

              NAM  92 vlsk........kgel..........vglkktLvfykgrapkgektdWvmheyrl 128
                                  +  +          ++ k +L f+  + ++g ++ Wvmhey++
  ONIVA03G26150.1 100 R--LvvpgngggG--VdgsggsgleiTWRKYVLSFFA-EGEQG-SSGWVMHEYAV 148
                      2..1234566540..1555666667699999*****3.44443.89*******86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MAGADGLPPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTPLADHTRG  60
DEAFFFAGAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LVVPGNGGGG VDGSGGSGLE  120
ITWRKYVLSF FAEGEQGSSG WVMHEYAVTS SADLASSPLR LYRVQKRKRE PQCLDSHDDE  180
DGGDQERAAP RRGVALPAAD GTDQGSYGVI DGEPSLVSHC LPDQIVPPAE EADATAGAVD  240
EESWSPPQPA SPTAALVKQN SYDLMVISSL LFSDLPDRID DDDLSVSQTE GTELSEQGSS  300
GVIDDDYWRE ADATGGAERE EIALLDEERC PQPQPAPPTD ALVPPLQGQN SYDVMADSSL  360
LFADLPGRID DDELQRSLRV SDMPDLFLSQ TEEAGAGGGG GAAPVLNKQS NSSPLGVMDS  420
EVPIVLSDLE FPESIDEVLS YIDFATDDCL DFDMDELFSD MPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.25e-13NAC family protein