PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA03G15100.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 307aa MW: 32506.3 Da PI: 5.9785

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G15100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.5e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ + +G+g+W++++++ g ++R++k+c++r+ +yl ONIVA03G15100.1 14 KGPWTAEEDAKLLAYTSTHGTGNWTSVPQRAGrLKRCGKSCRLRYTNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	53.5	5.4e-17	70	111	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eE+el+v ++++lG++ W++Ia+ ++ gRt++++k++w++ ONIVA03G15100.1 70 NFTQEEEELIVTLHAMLGSR-WSLIANQLP-GRTDNDVKNYWNT 111 89****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGRPPCCDKA NVKKGPWTAE EDAKLLAYTS THGTGNWTSV PQRAGRLKRC GKSCRLRYTN 60 YLRPNLKHEN FTQEEEELIV TLHAMLGSRW SLIANQLPGR TDNDVKNYWN TKLSKKLRQR 120 GIDPITHRPI ADLMQSIGTL AIRPPPAAGA APPPCLPVFH DAPYFAALQH QHQQQQVVTH 180 VDADAPASPD SQHLQLNWSD FLADDAAGHG ADAPAPQAAL GQYQEGSAPA ATAVVGGGRA 240 FGDVDGASAG VGAGTDDGAG AASAFIDAIL DCDKEMGVDQ LIAEMLADPA YYGGGGGSSS 300 SELGWGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56110.1	4e-64	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G15100.1