PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA03G05350.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 315aa    MW: 33243.2 Da    PI: 6.3088
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA03G05350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.6e-202776255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y+GVr++  +g+WvAeIr+p   +kr+r +lg+f taeeAa a+++a+++l+g
  ONIVA03G05350.1 27 EYRGVRQRT-WGKWVAEIREP---NKRTRLWLGSFATAEEAALAYDEAARRLYG 76
                     69****999.**********9...337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MESYGRKRAW KKGPTRGKGG PQNAACEYRG VRQRTWGKWV AEIREPNKRT RLWLGSFATA  60
EEAALAYDEA ARRLYGPDAF LNLPHLRAAS AAAAHQRLRW LPASAAARGG AAAVPAYGLL  120
NLNAQHNVHV IHQRLQELKN SSSSPTKPPP RTPTRANPPP PPLPTSSPCS TVTNSVGSAA  180
LPPPMSCFQA LEQAMAATAA MESAPCDDDA AVVGFGADKP QLDLKEFLQQ IGVLKADDDG  240
ATGKNGAVHG DDGELADAFG FGGSGEFDWD ALAADMSDIA GGHGGALGAN GGFQMDDLHE  300
VEQFGGCMPI PIWDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.14e-43ERF family protein