PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

ONIVA03G05020.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 440aa MW: 47031.8 Da PI: 7.8021

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G05020.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.8	1.3e-39	102	162	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC s++tkfCyynny+++qPr+fCk+C+ryWt+GGa+rnvPvG+grrk+k++s ONIVA03G05020.1 102 PDKILPCPRCSSMDTKFCYYNNYNINQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKSKSVS 162 7899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MGECKVGGGG GGGDCLIKLF GKTIPVPEPG ACAAGDVDKD LQHSGSSTTE PKTQENTVQD 60 STSPPPQPEV VDTEDSSADK NSSENQQQQG DTANQKEKLK KPDKILPCPR CSSMDTKFCY 120 YNNYNINQPR HFCKNCQRYW TAGGAMRNVP VGAGRRKSKS VSAASHFLQR VRAALPGDPP 180 LYAPVKTNGT VLSFGSDLST LDLTEQMKHL KDKFIPTTGI KNTDEMPVGL CAEGLSKTEE 240 SNQTNLKEKV SADRSPNVAQ HPCMNGGAMW PFGVAPPPAY YTSSIAIPFY PAAAAAVAAY 300 WGCMVPGAWN APWPPQSQSQ SVSSSSAASP VSTMTNCFRL GKHPRDGDEE LDSKGNGKVW 360 VPKTVRIDDV DEVARSSIWS LIGIKGDKVG ADHGRGCKLA KVFESKDEAK TSTHTAISSL 420 PFMQGNPAAL TRSVTFQEGS

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MGECKVGGGG GGGDCLIKLF GKTIPVPEPG ACAAGDVDKD LQHSGSSTTE PKTQENTVQD  60
STSPPPQPEV VDTEDSSADK NSSENQQQQG DTANQKEKLK KPDKILPCPR CSSMDTKFCY  120
YNNYNINQPR HFCKNCQRYW TAGGAMRNVP VGAGRRKSKS VSAASHFLQR VRAALPGDPP  180
LYAPVKTNGT VLSFGSDLST LDLTEQMKHL KDKFIPTTGI KNTDEMPVGL CAEGLSKTEE  240
SNQTNLKEKV SADRSPNVAQ HPCMNGGAMW PFGVAPPPAY YTSSIAIPFY PAAAAAVAAY  300
WGCMVPGAWN APWPPQSQSQ SVSSSSAASP VSTMTNCFRL GKHPRDGDEE LDSKGNGKVW  360
VPKTVRIDDV DEVARSSIWS LIGIKGDKVG ADHGRGCKLA KVFESKDEAK TSTHTAISSL  420
PFMQGNPAAL TRSVTFQEGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-66	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G05020.1