PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA03G03740.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

C2H2

Protein Properties

Length: 1463aa MW: 160200 Da PI: 5.9773

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G03740.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.7e-05	1353	1378	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C+++F +k +L+ H+r+ + ONIVA03G03740.3 1353 FQCDieFCDMTFETKAELRAHQRNiC 1378 899999*****************877 PP
2	zf-C2H2	12.6	0.00042	1378	1400	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+Fs++ +LkrH+ +H ONIVA03G03740.3 1378 CTdeSCGKRFSSHKYLKRHQCVH 1400 77778***************998 PP
3	zf-C2H2	13.7	0.00019	1436	1462	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 ykC+ dCg+sF+ s++ rH ++ H ONIVA03G03740.3 1436 YKCSapDCGQSFRYVSDYSRHRKKfnH 1462 99********************98666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1463 aa Download sequence
MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC 60 KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH 120 QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK 180 ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI 240 ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG 300 DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLILVQYP GEFVVTFPRA YHVGFSHGFN 360 CGEAANFATP QWLKFAKEAA VRRAVMNYLP MLSHQQLLNP RELLSGIRTS RLRDRKKEDR 420 ELLVKQEFLQ DMISENELIC SFLGKKSVDN VVLWEPDLLP SLTALHPCSS CSKAPEKKGE 480 DGPRIGSTQS SSKDDSSSDG TACMTGTQSK GLSMDSKQAP EGEKLDTDDG DDLPFDLSID 540 SGSLTCVACG ILGYPFMAIL QPSRKALEEI SLVDKERYKL SCEKEICSNV LPCSPNDGSS 600 GCPLIANRSS SPVENANLSH QDVKPIRSDI SLMGKEFNGT LGKHIGTSCS CSSENTIHPY 660 GDTETPEKKI PSDCPGSELS KQSGRGDVNV PDVEGSEETI SWNTGCAFAR PRIFCLQHAL 720 EIEELLASKG GVHALIICHA DYVKLKALAI SIAEEIEFQF DYKDVALANA SKSNLHLINI 780 SIDDEGYEEE GTDWTSRMGL NLKHSSKIRK ETSESQEQPP LSFWGLFSKP SPISVVSNLK 840 WLCRKARTPY KVIGYASSPD VVATPDKVKP AVTKTQIDTS GNAHENIGSE QTLQQDCVLQ 900 ESNDVADMCK RPKVNDQDGH SLINIPIAVA EYPMMHQVCE RPVSVSACDD PICSFDSQDS 960 PTTVAVSAGK PTREQCGAES TELSTVKQFL DNGLIAEGGS MNFISNHEHL ESDNATSVCK 1020 DEQLQVQQDQ LAMVLCNNPN TELVAGELHG GAASSTLENE DSCGNTSYCS DTVLKNSKPD 1080 TDDQPETCDR SVVLVTPKSS CDQMISSSDR SCSLTLDCPV STDAAFSSEK LSMAHDLMGS 1140 ELQAVHNSKA EVAASLTDVK GAKLNSIHTA QLPHESPSSD FIISEGAQSA STTAIPRKNG 1200 TSMHTESNSI DILLGVLADE SKVSSGKDEV GKASLTLMTL AGNDQSADDV TQDEVAEITD 1260 PSHGFCASDI VSRSIGSSNR TNIICYARRK HKRKSGSEFN INSPQSLGSF VRSPCESLRP 1320 RTRPAIVEDM TNETKTAEAS TANKRKKAKV EAFQCDIEFC DMTFETKAEL RAHQRNICTD 1380 ESCGKRFSSH KYLKRHQCVH RDERPFKCPW DGCPMTFKWL WAQTEHIRVH TGERPYKCSA 1440 PDCGQSFRYV SDYSRHRKKF NHY

Sequence ? help Back to Top

Protein Sequence Length: 1463 aa Download sequence

MPPQPPPAAS ASASAPDPAV PAWLRGLPRA PEYRPTESEF ADPIAFLSRV EREAAAYGIC  60
KVIPPHPRPS RRFVFAHLNR SLVSSCDAPA PSPAAASDSS IPPSSSSPPP ASAAVFTTRH  120
QELGNPRRGR PTPQVLKQVW QSGERYTLDQ FESKSRAFSK THLAGLHEPT ALAVESLFWK  180
ASADRPIYIE YANDVPGSGF AAPVQLQRKK KQKRETAPMD EWEKSSGWRL SNSPWNLQAI  240
ARAPGSLTRF MPDDVPGVTS PMVYIGMLFS WFAWHVEDHD LHSLNFLHTG APKTWYAVPG  300
DRAVELEEVI RVHGYGGNTD RIASLAVLGE KTTLILVQYP GEFVVTFPRA YHVGFSHGFN  360
CGEAANFATP QWLKFAKEAA VRRAVMNYLP MLSHQQLLNP RELLSGIRTS RLRDRKKEDR  420
ELLVKQEFLQ DMISENELIC SFLGKKSVDN VVLWEPDLLP SLTALHPCSS CSKAPEKKGE  480
DGPRIGSTQS SSKDDSSSDG TACMTGTQSK GLSMDSKQAP EGEKLDTDDG DDLPFDLSID  540
SGSLTCVACG ILGYPFMAIL QPSRKALEEI SLVDKERYKL SCEKEICSNV LPCSPNDGSS  600
GCPLIANRSS SPVENANLSH QDVKPIRSDI SLMGKEFNGT LGKHIGTSCS CSSENTIHPY  660
GDTETPEKKI PSDCPGSELS KQSGRGDVNV PDVEGSEETI SWNTGCAFAR PRIFCLQHAL  720
EIEELLASKG GVHALIICHA DYVKLKALAI SIAEEIEFQF DYKDVALANA SKSNLHLINI  780
SIDDEGYEEE GTDWTSRMGL NLKHSSKIRK ETSESQEQPP LSFWGLFSKP SPISVVSNLK  840
WLCRKARTPY KVIGYASSPD VVATPDKVKP AVTKTQIDTS GNAHENIGSE QTLQQDCVLQ  900
ESNDVADMCK RPKVNDQDGH SLINIPIAVA EYPMMHQVCE RPVSVSACDD PICSFDSQDS  960
PTTVAVSAGK PTREQCGAES TELSTVKQFL DNGLIAEGGS MNFISNHEHL ESDNATSVCK  1020
DEQLQVQQDQ LAMVLCNNPN TELVAGELHG GAASSTLENE DSCGNTSYCS DTVLKNSKPD  1080
TDDQPETCDR SVVLVTPKSS CDQMISSSDR SCSLTLDCPV STDAAFSSEK LSMAHDLMGS  1140
ELQAVHNSKA EVAASLTDVK GAKLNSIHTA QLPHESPSSD FIISEGAQSA STTAIPRKNG  1200
TSMHTESNSI DILLGVLADE SKVSSGKDEV GKASLTLMTL AGNDQSADDV TQDEVAEITD  1260
PSHGFCASDI VSRSIGSSNR TNIICYARRK HKRKSGSEFN INSPQSLGSF VRSPCESLRP  1320
RTRPAIVEDM TNETKTAEAS TANKRKKAKV EAFQCDIEFC DMTFETKAEL RAHQRNICTD  1380
ESCGKRFSSH KYLKRHQCVH RDERPFKCPW DGCPMTFKWL WAQTEHIRVH TGERPYKCSA  1440
PDCGQSFRYV SDYSRHRKKF NHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	207	214	QRKKKQKR
2	208	215	RKKKQKRE
3	1288	1294	RRKHKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	1e-168	C2H2 family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G03740.3