PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA03G01340.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 1389aa MW: 156929 Da PI: 7.3322

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA03G01340.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71.7	9.8e-23	1127	1188	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++W KYGqK++ g+ +prsY+rC ++ gC ++k+v+ +++d ++++++Y geH+++ ONIVA03G01340.1 1127 VDDGFSWVKYGQKDILGTMYPRSYFRCIHRqtkGCLATKQVQPTDDDHQILDVIYYGEHTCD 1188 59************************998889************************97 PP
2	WRKY	78.7	6.4e-25	1248	1309	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG K++ g+++prsY+rCt++ gC ++k+++r + dp +++++Y+g+H+++ ONIVA03G01340.1 1248 LDDGYSWRKYGLKDILGAKYPRSYFRCTHRntqGCVATKQIQRRDGDPLLFDVVYHGDHTCS 1309 59*************************98889************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1389 aa Download sequence
MEGTVFNLPG RLEELLCHHG SMLPKGADEE IPLIKQDLEE IISILHGHSE PKLEDHGMVV 60 RCWMKEVREL SYDIEDSIDQ YKHAARSQNR PNIRHRKFNR WRGNKIPCIP QKLKQRLWMA 120 NKIREFSLRA QEALQRHAMY NNLGGVASTA STTRGDVCSA TPLHPTQTQF REHVDNVRSV 180 SIEADGMEAA LNDLNKLKNL LAGIPTASLV QFREHADKVR GIHTDIEAIL NKLENIPPGI 240 TITTTTRGDV SSTSSRQPTR FMESTCHVGI DAAMDQLENL IDVCGEEKLK VVSIVGVGGV 300 GKTTLANKLY HKLRWQFECW AFVRSSQKTD MRRLLINILS QVRPHQSPDN WKVHSLISSI 360 RTYLQDKRGC VCCLLSLISA LATIRPHLAK DIPPIKGFLI VIDDLWATST WDIIKCALPE 420 GNKSSRILTT TEIEDLALQS CSYDLKFIFK MIPFGEDDSR KLLFSIVFGS HSKCPPEVSE 480 TLYDIVRKCG GLPLAIVTVA SLLASQLDKL EQWDYINKSL GYSLMANPTL EGMKQLLNLC 540 YSNLPQHLKA CMLYLSMYQG DHIIWKDDLV NQWIAEGFIC ATEEHDKEEI SRGYFDELVG 600 RKIIQPVHID DSGEVLSCVV HHIVLNFVTY KSIEENFIIA IDHSQATIRF ADKVRRLSIH 660 FSNVEDAPPP TNMRLFQVRT IAFFGVLKYM PFIMEFRLIK VLFLHFLGDE DSTGIVDLTK 720 ISELVRLRYL KVTSNATVKL PTRLQGLQYL ETLKIDGKIS EVPSDIIHLP GLLHLTLPAK 780 TNLPTGISHV TSLRTIGYFD LSCNSVENLW RLGELTNLWD LQLTYSEIHS DNLKNNMKYL 840 GPILGKLRNL KSITLSADGS SCPDTLRIDR DTKTRIYVDG WSSVSSPPAL LQRFELLPCV 900 CIFSNLPNWI GQLGNLCILK IGIREVTSNN IDVLGVLPEL IVLSLYVHTK PAERIVFDNA 960 GFSILRYFKF ICSVAWMKFE VGAMPSLRKL KLGFDVHRAD QHDIIPVGIE HLSGLEEISA 1020 KIRVACSAHD HCKRFAESAL SNAFMMHPGR PSVNIRCVDW TFDGKDDDNV RTQEEEHRTL 1080 QKQHHTAKEG SNEKSPVKQR DPREGAHKSV DGRETLRRIR VKVSSTVDDG FSWVKYGQKD 1140 ILGTMYPRSY FRCIHRQTKG CLATKQVQPT DDDHQILDVI YYGEHTCDQS ARSDDRQPKS 1200 SRPAASSNLQ EPQQPGLEQS RPAAKRRRKT VRWKTQVRVS SVQDVGPLDD GYSWRKYGLK 1260 DILGAKYPRS YFRCTHRNTQ GCVATKQIQR RDGDPLLFDV VYHGDHTCSE RASLNEQVTW 1320 PRSSASSTEQ SSTITYTAAA GSVEDDEEGV TSATNFLSMD DMLDLGGGDV IDMDFPSFDF 1380 DAIDALLLG

Sequence ? help Back to Top

Protein Sequence Length: 1389 aa Download sequence

MEGTVFNLPG RLEELLCHHG SMLPKGADEE IPLIKQDLEE IISILHGHSE PKLEDHGMVV  60
RCWMKEVREL SYDIEDSIDQ YKHAARSQNR PNIRHRKFNR WRGNKIPCIP QKLKQRLWMA  120
NKIREFSLRA QEALQRHAMY NNLGGVASTA STTRGDVCSA TPLHPTQTQF REHVDNVRSV  180
SIEADGMEAA LNDLNKLKNL LAGIPTASLV QFREHADKVR GIHTDIEAIL NKLENIPPGI  240
TITTTTRGDV SSTSSRQPTR FMESTCHVGI DAAMDQLENL IDVCGEEKLK VVSIVGVGGV  300
GKTTLANKLY HKLRWQFECW AFVRSSQKTD MRRLLINILS QVRPHQSPDN WKVHSLISSI  360
RTYLQDKRGC VCCLLSLISA LATIRPHLAK DIPPIKGFLI VIDDLWATST WDIIKCALPE  420
GNKSSRILTT TEIEDLALQS CSYDLKFIFK MIPFGEDDSR KLLFSIVFGS HSKCPPEVSE  480
TLYDIVRKCG GLPLAIVTVA SLLASQLDKL EQWDYINKSL GYSLMANPTL EGMKQLLNLC  540
YSNLPQHLKA CMLYLSMYQG DHIIWKDDLV NQWIAEGFIC ATEEHDKEEI SRGYFDELVG  600
RKIIQPVHID DSGEVLSCVV HHIVLNFVTY KSIEENFIIA IDHSQATIRF ADKVRRLSIH  660
FSNVEDAPPP TNMRLFQVRT IAFFGVLKYM PFIMEFRLIK VLFLHFLGDE DSTGIVDLTK  720
ISELVRLRYL KVTSNATVKL PTRLQGLQYL ETLKIDGKIS EVPSDIIHLP GLLHLTLPAK  780
TNLPTGISHV TSLRTIGYFD LSCNSVENLW RLGELTNLWD LQLTYSEIHS DNLKNNMKYL  840
GPILGKLRNL KSITLSADGS SCPDTLRIDR DTKTRIYVDG WSSVSSPPAL LQRFELLPCV  900
CIFSNLPNWI GQLGNLCILK IGIREVTSNN IDVLGVLPEL IVLSLYVHTK PAERIVFDNA  960
GFSILRYFKF ICSVAWMKFE VGAMPSLRKL KLGFDVHRAD QHDIIPVGIE HLSGLEEISA  1020
KIRVACSAHD HCKRFAESAL SNAFMMHPGR PSVNIRCVDW TFDGKDDDNV RTQEEEHRTL  1080
QKQHHTAKEG SNEKSPVKQR DPREGAHKSV DGRETLRRIR VKVSSTVDDG FSWVKYGQKD  1140
ILGTMYPRSY FRCIHRQTKG CLATKQVQPT DDDHQILDVI YYGEHTCDQS ARSDDRQPKS  1200
SRPAASSNLQ EPQQPGLEQS RPAAKRRRKT VRWKTQVRVS SVQDVGPLDD GYSWRKYGLK  1260
DILGAKYPRS YFRCTHRNTQ GCVATKQIQR RDGDPLLFDV VYHGDHTCSE RASLNEQVTW  1320
PRSSASSTEQ SSTITYTAAA GSVEDDEEGV TSATNFLSMD DMLDLGGGDV IDMDFPSFDF  1380
DAIDALLLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-32	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA03G01340.1