PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA02G36590.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRF

Protein Properties

Length: 315aa MW: 34882.9 Da PI: 7.7451

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.4	6.9e-25	90	133	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CE+H+hrg++rsrk++e ONIVA02G36590.1 90 DPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVE 133 79***************************************998 PP
2	QLQ	60	6.6e-21	18	53	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l+yKy+a++ P+P++L++++++ ONIVA02G36590.1 18 PFTASQWQELEHQALIYKYMASGTPIPSDLILPLRR 53 9********************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MMMMSGRPSG GAGGGRYPFT ASQWQELEHQ ALIYKYMASG TPIPSDLILP LRRSFLLDSA 60 LATSPSLAFP PQPSLGWGCF GMGFGRKAED PEPGRCRRTD GKKWRCSKEA YPDSKYCEKH 120 MHRGKNRSRK PVEMSLATPP PPSSSATSAA SNTSGHATKE VHGEHAFFSD GTEREHHHAA 180 AGHGQWQFKQ LGMEPKQSTT PLFPGAGYGH TAASPYAIDL SKEDDDEKER RQQQQQQQQH 240 CFLLGADLRL EKPAGHDHAA AAQKPLRHFF DEWPHEKNSK GSWMGLEGET QLSMSIPMAA 300 NDLPITTTSR YHNDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-52	GRF family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36590.1