PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA02G36080.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Protein Properties

Length: 1657aa MW: 184468 Da PI: 8.709

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G36080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.2	3.6e-19	1520	1572	33	85
-SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 ++ l +ed +g++W+++++ +++s++yvltkGW++Fv+++gL++gD++vF+ + ONIVA02G36080.1 1520 GVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSGS 1572 56799*********************************************954 PP

Sequence ? help Back to Top
Protein Sequence Length: 1657 aa Download sequence
MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA 60 ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAD KRGRRGWAAA 120 GGGVARGGGG AGDGRDGEDK CRPAMEAAEA GSMAWRTAVR GRQRSARTTV RPTVAGAIGA 180 ERRGQAGGGG EAGTMGMGGG LVSTFSRMLR SNRMLAGLRL RCTSDSGLVW WRNSSAVVIS 240 AEILNRWLHG IDGRRLQLHR AAAAASPSHG APEDTPESST RHDDDRLLGG LLSQAFDEHS 300 CRSRYTSSLY RRRSPFRPST YLVERLRRYE ARHKRCGPGS ALFQEAVEHL RSGRNAARSE 360 CQYVVWTPFN GLGNRMLALA STFLYALLTD RVLLVHAPPE FDGLFCEPFP GSSWTLPADF 420 LITDFDGVFT MWSPTSYKNM RQAGTISNAT AEQSLPAYVF LDLIQSFTDA AFCDDDQQVL 480 AKFNWMVIKS DVYFAAMLFL MPAYERELTQ LFPEKEAVFH HLARYLFHPS NDVWGIVHRF 540 YEAYLARADE LVGLQVRVFP EMPIPFDNMY EQIIRCSEQE GLLPKLGQTV VVTAANGSSV 600 VAPSTKLTSI LVTSLFPDYY DRIRGVYHAR PTETGEYVAV HQPSHEREQR TEARGHNQRA 660 LAEIYLLSFC DRVVTSAVST FGYIAHGLAG VRPWVLLRPP SPVARAEPAC VRSETVEPCL 720 QALPRRMCGA AEGSDIGALV PHIRHCEDVQ KGVKLGWPPA GRAAENEARR WGRLRRASAR 780 AALVLCSLTM IPVVVVLHRC AVSSSWPDRV FEAKHIAGAG EQALPIETHM ERSGGGGADG 840 DEERLPLHHG FETERAAPWA AAESKPPPPP RGRFGRASVR AALAVCFLAI PAVLLLQRWQ 900 AGSSPEWLFE IEPPADGDRD MQDDLPDDLT ASQYIGYDKF LGGLLQEGFD EVSCRSRYQF 960 ARYHKNFTRI PSSYLLERLR RQEALQKKCG PGTKSYKQAV KLLRSSQGVN MTTDCNYLFL 1020 TVHAGLGNRM LEIASAFLYA LLTNRILLLD RYQEIGDLFC EPFPGTSWLM PSDFPLNYGE 1080 FTQSSPESYG NMQQNKVVGD NTDRSLAGFR PPYVFLYLDG NYEFHDKLFF CEDDQQFLQD 1140 VPWLIMRTDM YFIPSLFLIP SYQDELSRLF PEKDAVFHHL ARYLFHPTNS IWYSVKGYYR 1200 SYLAKANKTV GIQIRIFEKE GILQKNGRFP YVLEQILSCA QNEKLLPEIS MKDEAEAPTA 1260 TKNNQTIAVL TTSLSSWYSD QIQKKYSEHP TVDGTRVEVY QPSHEEYQRS KNKKHNMKAL 1320 AEIYLLSMTD VLITSGFSTF GYAAQGLSGL TPWIMFRSEN HAMPDPPCRR AMSIEPCFHQ 1380 APFYDCKAKR NADLGKMVPF VRHCEDVSWG LKVVLAAKSQ MGVWEAELVG KGSEIGLAIT 1440 LLPLLAVFLL GENVRLAVND FAKAHQPAGT SDTNTSAFRR RQAQPPAGAQ AARGEALPAA 1500 ADELRRLRHR RRGHLQLCKG VLLNFEDGEG KVWRFRYSCW NSSQSYVLTK GWSRFVREKG 1560 LRAGDTIVFS GSAYGPDKLL FIDCKKNNTA AATGDEKPIT SGEATRVVRL FGMDITGGGG 1620 DCRKRERAVE MGQEAFLMKR QCVHSTPHYT VRSAKAI

Sequence ? help Back to Top

Protein Sequence Length: 1657 aa Download sequence

MYYVRGAGGS WEKAESEACV HESARRRGVP MDEKRAARTP RAGARNAVNG GESGCCSEKA  60
ARWGWRAPVE VAVVGFVATL TLLVLLYGGT GSLLSFTSPR TEFVRKLAAD KRGRRGWAAA  120
GGGVARGGGG AGDGRDGEDK CRPAMEAAEA GSMAWRTAVR GRQRSARTTV RPTVAGAIGA  180
ERRGQAGGGG EAGTMGMGGG LVSTFSRMLR SNRMLAGLRL RCTSDSGLVW WRNSSAVVIS  240
AEILNRWLHG IDGRRLQLHR AAAAASPSHG APEDTPESST RHDDDRLLGG LLSQAFDEHS  300
CRSRYTSSLY RRRSPFRPST YLVERLRRYE ARHKRCGPGS ALFQEAVEHL RSGRNAARSE  360
CQYVVWTPFN GLGNRMLALA STFLYALLTD RVLLVHAPPE FDGLFCEPFP GSSWTLPADF  420
LITDFDGVFT MWSPTSYKNM RQAGTISNAT AEQSLPAYVF LDLIQSFTDA AFCDDDQQVL  480
AKFNWMVIKS DVYFAAMLFL MPAYERELTQ LFPEKEAVFH HLARYLFHPS NDVWGIVHRF  540
YEAYLARADE LVGLQVRVFP EMPIPFDNMY EQIIRCSEQE GLLPKLGQTV VVTAANGSSV  600
VAPSTKLTSI LVTSLFPDYY DRIRGVYHAR PTETGEYVAV HQPSHEREQR TEARGHNQRA  660
LAEIYLLSFC DRVVTSAVST FGYIAHGLAG VRPWVLLRPP SPVARAEPAC VRSETVEPCL  720
QALPRRMCGA AEGSDIGALV PHIRHCEDVQ KGVKLGWPPA GRAAENEARR WGRLRRASAR  780
AALVLCSLTM IPVVVVLHRC AVSSSWPDRV FEAKHIAGAG EQALPIETHM ERSGGGGADG  840
DEERLPLHHG FETERAAPWA AAESKPPPPP RGRFGRASVR AALAVCFLAI PAVLLLQRWQ  900
AGSSPEWLFE IEPPADGDRD MQDDLPDDLT ASQYIGYDKF LGGLLQEGFD EVSCRSRYQF  960
ARYHKNFTRI PSSYLLERLR RQEALQKKCG PGTKSYKQAV KLLRSSQGVN MTTDCNYLFL  1020
TVHAGLGNRM LEIASAFLYA LLTNRILLLD RYQEIGDLFC EPFPGTSWLM PSDFPLNYGE  1080
FTQSSPESYG NMQQNKVVGD NTDRSLAGFR PPYVFLYLDG NYEFHDKLFF CEDDQQFLQD  1140
VPWLIMRTDM YFIPSLFLIP SYQDELSRLF PEKDAVFHHL ARYLFHPTNS IWYSVKGYYR  1200
SYLAKANKTV GIQIRIFEKE GILQKNGRFP YVLEQILSCA QNEKLLPEIS MKDEAEAPTA  1260
TKNNQTIAVL TTSLSSWYSD QIQKKYSEHP TVDGTRVEVY QPSHEEYQRS KNKKHNMKAL  1320
AEIYLLSMTD VLITSGFSTF GYAAQGLSGL TPWIMFRSEN HAMPDPPCRR AMSIEPCFHQ  1380
APFYDCKAKR NADLGKMVPF VRHCEDVSWG LKVVLAAKSQ MGVWEAELVG KGSEIGLAIT  1440
LLPLLAVFLL GENVRLAVND FAKAHQPAGT SDTNTSAFRR RQAQPPAGAQ AARGEALPAA  1500
ADELRRLRHR RRGHLQLCKG VLLNFEDGEG KVWRFRYSCW NSSQSYVLTK GWSRFVREKG  1560
LRAGDTIVFS GSAYGPDKLL FIDCKKNNTA AATGDEKPIT SGEATRVVRL FGMDITGGGG  1620
DCRKRERAVE MGQEAFLMKR QCVHSTPHYT VRSAKAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13260.1	5e-27	RAV family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G36080.1