PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA02G35050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB | ||||||||
Protein Properties | Length: 377aa MW: 40296.6 Da PI: 6.7108 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEde+l +++++ G g+W++ ++ g++R++k+c++rw +yl ONIVA02G35050.1 14 KGPWTTEEDEKLMEYIQKNGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E + ++++++ lG++ W++Ia++++ gRt++++k++w+++l ONIVA02G35050.1 67 RGKFTSAEKDTILQLHAVLGNK-WSAIAKHLP-GRTDNEIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 377 aa Download sequence |
MGRSPCCDEN GLKKGPWTTE EDEKLMEYIQ KNGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TSAEKDTILQ LHAVLGNKWS AIAKHLPGRT DNEIKNYWNT HLKKDLIQKG 120 IDPTTHRPRT DFFAALPQLI ALANLRQLVG QLPWDDPAAA AAGLQQAEAA QAAKFGQYLH 180 LQALLQPPPP SAATSPRSGC IGGAAAAMPG GDMEQMGAGL LSPPAMSSAA LSPMSTSSLS 240 PLPSPMSSTA LSPLPPSSFF GNGGQGSFLA GQLPNIQMHG SSLFDQSAAI INDANHNQDY 300 AASTGEREII NGATKTTTTT LLPEGSLPPL ADYPTISNLG DVYSTPSCDG NITEFPLLPD 360 ALFDELMRDY VSPSSSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-90 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA02G35050.1 |