PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA02G34070.4

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 503aa MW: 55803.7 Da PI: 8.8744

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G34070.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.2	0.00035	190	207	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR +iN++ ONIVA02G34070.4 190 RSKHSATEQRRRTKINDR 207 889*************96 PP
2	HLH	24	7.1e-08	251	283	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++e LrellP+ ++K +Ka+ L +++eYI+ Lq ONIVA02G34070.4 251 RLEILRELLPHT----DQKRDKASFLSEVIEYIRFLQ 283 5899*****8....8*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MQLFQGEEPA HDFLSLRAGG GSSSPPFQHR EEQHSSHSSR GYGMEIRRSL RPLELAKQRG 60 RSSGNGTAAG SAVDGASPAG SDSEEHVLPG GVGTFSIRHA SGTPSREEAG SHGGVRRSAF 120 AFAPALHGAR MENAHETGGR SGSRAHRAPS TMWQDSAIDQ RSIGQTPYEA TRAEGRSSAS 180 SADQGPSTPR SKHSATEQRR RTKINDRQAS RGTNQAQQDI ILAAFNSKTI SYKYMVQEMC 240 SKMQFFMLSF RLEILRELLP HTDQKRDKAS FLSEVIEYIR FLQEKVQKYE EADPERNHED 300 SKSMPWAKVY YRSCWRNTKN TSQVQGEDLS PSTQDMNNEQ YGPKHISAAQ PALFNTQSVT 360 STTTSSSHMA TGTPQNLEKN STPSNQPPWL SMSTMRQESE PGNKMPNKHE KQTLHDENHS 420 ISSAYSQGLF NRLTEALKKS GLDPSQANIA VEINLAKRAR DNTSDNSKIV CLIIILYLCP 480 DFTSQINEDE EPIQITKRRC NKS

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MQLFQGEEPA HDFLSLRAGG GSSSPPFQHR EEQHSSHSSR GYGMEIRRSL RPLELAKQRG  60
RSSGNGTAAG SAVDGASPAG SDSEEHVLPG GVGTFSIRHA SGTPSREEAG SHGGVRRSAF  120
AFAPALHGAR MENAHETGGR SGSRAHRAPS TMWQDSAIDQ RSIGQTPYEA TRAEGRSSAS  180
SADQGPSTPR SKHSATEQRR RTKINDRQAS RGTNQAQQDI ILAAFNSKTI SYKYMVQEMC  240
SKMQFFMLSF RLEILRELLP HTDQKRDKAS FLSEVIEYIR FLQEKVQKYE EADPERNHED  300
SKSMPWAKVY YRSCWRNTKN TSQVQGEDLS PSTQDMNNEQ YGPKHISAAQ PALFNTQSVT  360
STTTSSSHMA TGTPQNLEKN STPSNQPPWL SMSTMRQESE PGNKMPNKHE KQTLHDENHS  420
ISSAYSQGLF NRLTEALKKS GLDPSQANIA VEINLAKRAR DNTSDNSKIV CLIIILYLCP  480
DFTSQINEDE EPIQITKRRC NKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.3	1e-28	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G34070.4