PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G31530.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 344aa MW: 36827 Da PI: 4.5009

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G31530.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed +l+ +++++G +W++ ++ g+ R++k+c++rw +yl ONIVA02G31530.1 16 RGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	49.7	8.4e-16	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T++E++ +++++ +lG++ W++Ia++++ gRt++++k+ w+++l ONIVA02G31530.1 69 RGNFTADEEDTIIKLHGLLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHANWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDLKRG NFTADEEDTI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRVSQ 120 RKKPGDTKKK GKAADASDDA DAHSPSSSAS SSTTTVANNN NSGDTAGEQC GTSKEPENVD 180 VSFFEQDIDI SDMLVDAPTE APLVAAPMPP SPCSSSSLTT TTCVGAVSDE LLDLPEIDIE 240 PDIWSIIDGY GGDEPVVSGA DGDATVPCTA SPGEEGAEWW VENLEKELGL WGPMDESLAH 300 PDPPGQVCYP GPLTETEGDP VSTYFQSGPT ASPLQEIASP AVLS

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MGRGRAPCCA KVGLNRGSWT PQEDMRLIAY IQKHGHANWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDLKRG NFTADEEDTI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRVSQ  120
RKKPGDTKKK GKAADASDDA DAHSPSSSAS SSTTTVANNN NSGDTAGEQC GTSKEPENVD  180
VSFFEQDIDI SDMLVDAPTE APLVAAPMPP SPCSSSSLTT TTCVGAVSDE LLDLPEIDIE  240
PDIWSIIDGY GGDEPVVSGA DGDATVPCTA SPGEEGAEWW VENLEKELGL WGPMDESLAH  300
PDPPGQVCYP GPLTETEGDP VSTYFQSGPT ASPLQEIASP AVLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	1e-68	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G31530.1