PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G22170.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB
Protein Properties Length: 323aa    MW: 37074.3 Da    PI: 10.6384
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G22170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.59.5e-16958148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                     r+rW +eEd +l+ +v+q+G++ W++++++m+  ++R +k+c +rw +yl
  ONIVA02G22170.1  9 RQRWRPEEDAILLAYVRQYGPREWSLVSQRMNrpLHRDAKSCLERWKNYL 58
                     89**********************************************97 PP
2Myb_DNA-binding34.25.9e-1164108147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g+ T +E+ l +++ +++G++ Wk+Ia++++ gRt+k +  +w  +
  ONIVA02G22170.1  64 KGSLTDDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 108
                      57789*****************.*********.*****999999766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MQPPPMRERQ RWRPEEDAIL LAYVRQYGPR EWSLVSQRMN RPLHRDAKSC LERWKNYLRP  60
GIKKGSLTDD EQRLVIRLQA KHGNKWKKIA AEVPGRTAKR LGKWWEVFKE KQQRELRDRD  120
RRRLPPPLDG DERGGAGGRY DWLLEDFADK LVNDHHRRMM AAPILPPWMS SSPSSSSSPS  180
VTLSLASAAV APAPAAPPPT EMEEGQRAWA AHRKEAAWRM KRVEMQLETE RACRRREAAE  240
EFEAKMRALR EEQAAAVERV EAEYREKMAG LRRDAEAKEQ KMAEQWAAKH ARLAKFLDQV  300
AACRRWPPVE INGGGGGGPG GGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.14e-65MYB family protein