PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA02G22000.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 347aa MW: 35223.1 Da PI: 8.8926

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G22000.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.3	6.9e-38	96	153	5	62
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +l+cprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+n k+s ONIVA02G22000.1 96 TLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRS 153 679***************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MVFSSLPIFL DPPNWTQMQQ QPLQCLIGGG GGGGSDHHHL MPPPSGLAPL PSAAGAADTA 60 ASAPAAAAQQ QQPRPAVVSM SERARLARVP LPEPGTLRCP RCDSTNTKFC YFNNYSLSQP 120 RHFCKACRRY WTRGGALRNV PVGGGCRRNT KRSTKKSSSS SSRQGGGAGN AAAAATSSSS 180 TTSTSTTATT SSAAAAAAAA AADVIASMQA GGALLPHHLI GGLPSSAAAA AALEASLEGY 240 HHHHHGHGHQ LPFLQPPPFL QQGLHGYHFA DGDVAAGAAL ADGGFPRGVA SGLLAQLASV 300 KMEEHGTNNG GGFVGAHEQY WHGGNGGGGW PAEFLSGFSS SSSGNVL

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MVFSSLPIFL DPPNWTQMQQ QPLQCLIGGG GGGGSDHHHL MPPPSGLAPL PSAAGAADTA  60
ASAPAAAAQQ QQPRPAVVSM SERARLARVP LPEPGTLRCP RCDSTNTKFC YFNNYSLSQP  120
RHFCKACRRY WTRGGALRNV PVGGGCRRNT KRSTKKSSSS SSRQGGGAGN AAAAATSSSS  180
TTSTSTTATT SSAAAAAAAA AADVIASMQA GGALLPHHLI GGLPSSAAAA AALEASLEGY  240
HHHHHGHGHQ LPFLQPPPFL QQGLHGYHFA DGDVAAGAAL ADGGFPRGVA SGLLAQLASV  300
KMEEHGTNNG GGFVGAHEQY WHGGNGGGGW PAEFLSGFSS SSSGNVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	5e-39	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G22000.1