PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

ONIVA02G18700.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

HSF

Protein Properties

Length: 475aa MW: 52785.5 Da PI: 5.0904

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G18700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.4	2.6e-34	22	113	2	101
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl k+ye+++d++++ ++sws ++ sfvv+++ efa ++Lp yFkhsnf+SF+RQLn+YgF+k++ e+ weF++++F kg+k+ll ONIVA02G18700.1 22 FLLKTYEMVDDPSTDAVVSWSdASDASFVVWNHPEFAARLLPAYFKHSNFSSFIRQLNTYGFRKIDPER---------WEFANEYFIKGQKHLL 106 9******************66679************************************999.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r+k ONIVA02G18700.1 107 KNIHRRK 113 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEVAAGARGG GAGGGGGGPA PFLLKTYEMV DDPSTDAVVS WSDASDASFV VWNHPEFAAR 60 LLPAYFKHSN FSSFIRQLNT YGFRKIDPER WEFANEYFIK GQKHLLKNIH RRKPIHSHSH 120 PPGALPDNER AIFEDEIERL SREKSNLQAD LWKSKQQQSG TMNQIEDLER RVLGMEQRQT 180 KMIAFLQQAS KNPQFVNKLV KMAEASSIFT DAFNKKRRLP GLDYSIENTE TTSFYDDHSS 240 TSKQETGNLL NQHFSDKLRL GLCPAMTESN IITLSTQSSN EDNGSPHGKH PECDMMGREC 300 LPLVPQMMEL SDTGTSICPS KSSCFAPPIS DEGLLTCHLS LTLASCSMDV DKSQGLNANG 360 TTIDNPTEAA TATMEKDDTI DRSFDDNQKK SADSRTADAT TPRADARVAS EAPAAPAAVV 420 NDKFWEQFLT ERPGCSETEE ASSGLRTDTS REQMENRQAY DHSRNDREDV EQLKL

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEVAAGARGG GAGGGGGGPA PFLLKTYEMV DDPSTDAVVS WSDASDASFV VWNHPEFAAR  60
LLPAYFKHSN FSSFIRQLNT YGFRKIDPER WEFANEYFIK GQKHLLKNIH RRKPIHSHSH  120
PPGALPDNER AIFEDEIERL SREKSNLQAD LWKSKQQQSG TMNQIEDLER RVLGMEQRQT  180
KMIAFLQQAS KNPQFVNKLV KMAEASSIFT DAFNKKRRLP GLDYSIENTE TTSFYDDHSS  240
TSKQETGNLL NQHFSDKLRL GLCPAMTESN IITLSTQSSN EDNGSPHGKH PECDMMGREC  300
LPLVPQMMEL SDTGTSICPS KSSCFAPPIS DEGLLTCHLS LTLASCSMDV DKSQGLNANG  360
TTIDNPTEAA TATMEKDDTI DRSFDDNQKK SADSRTADAT TPRADARVAS EAPAAPAAVV  420
NDKFWEQFLT ERPGCSETEE ASSGLRTDTS REQMENRQAY DHSRNDREDV EQLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-108	HSF family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G18700.1