 |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | ONIVA02G13670.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
|
||||||||
| Family | GeBP | ||||||||
| Protein Properties | Length: 512aa MW: 54808.7 Da PI: 10.21 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 43.2 | 1.1e-13 | 141 | 230 | 7 | 98 |
DUF573 7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsk.sqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98
w+ +De+ +L l+ +++g++ ++++++ v +s++ k k s++ eK+rrLK++++ kk+++g + +ke+d +++ls+ iWg+
ONIVA02G13670.1 141 WTTDDEVKILEVLVAHFKSHGTQ--LNVEGIIAAVGDSLERKSIKySDMYEKVRRLKQRYEATAKKVEHGGDLP-AKEDDLRMYQLSSEIWGK 230
**************999999954..699***********98865538***********************9965.567889**********95 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 512 aa Download sequence |
MRRRRRRRRT PTLTPTPKLR KVGGGDEEGE EVEGDSSESE PEPEPVKKES AKKAKAEAKK 60 KRAAPEPAPS GKAKKAKPEK SSSAAAPEPA PSLGKSKKAA KAEAAKAAAA EPAPSTGKVR 120 KSKLAPEPSP SSKSGKALSR WTTDDEVKIL EVLVAHFKSH GTQLNVEGII AAVGDSLERK 180 SIKYSDMYEK VRRLKQRYEA TAKKVEHGGD LPAKEDDLRM YQLSSEIWGK NTKDAGNSSK 240 NKKGQAKKDK VSGDSKEAAK EDKVDEAAIA VNEKGGTLAE NKKGKTNKQK TGMETKVGSS 300 KEAALAASPT KGKKKGSHKD KLDEEAKSGT AKVTSTIATD DDDGTLGGSK REKAGKEELD 360 GDTHIVMPKE ATTTAASDDG TLVGSKKGKA DNGKLDGDTR SVMPKEATAG TQNGGILTGG 420 ENHKEKVDKD ANVPSIRREY AELQSLYPNL ASFVNGIEAQ HPCGSTFKRA FEFISDDKAC 480 TLESKIKKQK IAEVRMQLRL ADTKKEVANA LE |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 2 | 7 | RRRRRR |
| 2 | 2 | 8 | RRRRRRR |
| 3 | 2 | 9 | RRRRRRRR |
| 4 | 3 | 8 | RRRRRR |
| 5 | 3 | 9 | RRRRRRR |
| 6 | 3 | 10 | RRRRRRRR |
| 7 | 3 | 10 | RRRRRRRT |
| 8 | 4 | 9 | RRRRRR |
| 9 | 4 | 11 | RRRRRRRT |
| 10 | 5 | 12 | RRRRRRRT |
| 11 | 59 | 101 | KKKRAAPEPAPSGKAKKAKPEKSSSAAAPEPAPSLGKSKKAAK |
| Link Out ? help Back to Top | |
|---|---|
| Ensembl | ONIVA02G13670.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
Supported By
|