PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA02G08330.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 230aa    MW: 24587.9 Da    PI: 8.3022
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA02G08330.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.11.8e-071536224
              AP2  2 gykGVrwdkkrgrWvAeIrdpse 24
                     +++GVr ++ +gr++AeIrdp +
  ONIVA02G08330.1 15 RFRGVRKRP-WGRYAAEIRDPAK 36
                     69*******.**********854 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MRRGGAAEED AEAARFRGVR KRPWGRYAAE IRDPAKKARA KTNFPLSLPH AQPQLHHHHH  60
HHLTYPAAAV VAARPATSSL SSTVESFGTR PRPVLPPRPP PPPPILDGDC RSDCGSSASV  120
VDDDCADAAA SPSCRLPFQF DLNLPPGGGG GFGLGVDSNL LHEPNGAIMG KDKVLLVALV  180
PTDPATDYPL VYPVVKCNMS RLWGNKYAAA PDLARHCLLT STQEQSFPCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.13e-07ERF family protein