PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA02G08210.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB

Protein Properties

Length: 301aa MW: 32322.2 Da PI: 8.6251

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA02G08210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.3e-19	11	56	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G ++W++I r ++ gR++k+c++rw + ONIVA02G08210.1 11 KGPWSPEEDEALRRLVERHGARNWTAIGRGIP-GRSGKSCRLRWCNQ 56 79****************************.*********985 PP
2	Myb_DNA-binding	54.7	2.3e-17	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eEd +++a+++lG++ W++Iar ++ gRt++ +k++w++ ONIVA02G08210.1 63 RRPFTAEEDAAILRAHARLGNR-WAAIARLLP-GRTDNAVKNHWNS 106 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MGMEAECDRI KGPWSPEEDE ALRRLVERHG ARNWTAIGRG IPGRSGKSCR LRWCNQLSPQ 60 VERRPFTAEE DAAILRAHAR LGNRWAAIAR LLPGRTDNAV KNHWNSSLKR KLATATDGGE 120 IDRPCKRVSP GPGSPTGSER SELSHGGCGS GSGGGQVFRP VPRPGGFDAI SAADVVRPPR 180 RRDDNDDDGD DDPLTSLSLS LSLPGFHHDS ARSHFQELPS PSRSPSPPPS PPAASPSAYP 240 FNADLVSAMQ EMIRTEVRNY MAGVGLRAGC GPGAVAESFM PQLVDGVMRA AAERVGVVTR 300 Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	6e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA02G08210.1